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Protein
Submitted name:

Putative DNA ligase, ATP-dependent

Gene

PP_1105

Organism
Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciPPUT160488:G1G01-1179-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase, ATP-dependentImported
Gene namesi
Ordered Locus Names:PP_1105Imported
OrganismiPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ88NU9

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_1105

Structurei

3D structure databases

ProteinModelPortaliQ88NU9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini321 – 453DNA_LIGASE_A3InterPro annotationAdd BLAST133

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
HOGENOMiHOG000036007
KOiK10747
OMAiWLFEESY

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q88NU9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFATLFLR LDATTSSNAK LEALRDYFDM APAEDAAWAV YFLAGGRPRQ
60 70 80 90 100
LVPTRLLREL ATTLAGLPDW LFEESYQAVG DLAETISLLL PLHADGNEEG
110 120 130 140 150
LATWVEQHLL PLRGLTPEQV RQRLPPLWAR LDRASLMLCL KLITGSFRVG
160 170 180 190 200
VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD IGHRPTAASY QRLIAPESAD
210 220 230 240 250
EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK WDGIRAQVVK
260 270 280 290 300
RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE
310 320 330 340 350
LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG EDWRSRPQHE
360 370 380 390 400
RRSQLEHLVD EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ
410 420 430 440 450
REALYGVGRT KDMGIWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA
460 470 480 490 500
VWDAPAGTPG RALVPFAKAY SGLSDEEMRK VDAIIRKTTV ETFGPVRSVT
510 520 530 540 550
PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE ADDLATLQAL

LA
Length:552
Mass (Da):62,122
Last modified:June 1, 2003 - v1
Checksum:iEBD3FC81539B5694
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA Translation: AAN66730.1
RefSeqiNP_743266.1, NC_002947.4
WP_010952268.1, NC_002947.4

Genome annotation databases

EnsemblBacteriaiAAN66730; AAN66730; PP_1105
GeneIDi1045250
KEGGippu:PP_1105
PATRICifig|160488.4.peg.1171

Similar proteinsi

Entry informationi

Entry nameiQ88NU9_PSEPK
AccessioniPrimary (citable) accession number: Q88NU9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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