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Q88NU9 (Q88NU9_PSEPK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PP_1105 EMBL AAN66730.1
OrganismPseudomonas putida (strain KT2440) [Complete proteome] [HAMAP] EMBL AAN66730.1
Taxonomic identifier160488 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q88NU9 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: EBD3FC81539B5694

FASTA55262,122
        10         20         30         40         50         60 
MKAFATLFLR LDATTSSNAK LEALRDYFDM APAEDAAWAV YFLAGGRPRQ LVPTRLLREL 

        70         80         90        100        110        120 
ATTLAGLPDW LFEESYQAVG DLAETISLLL PLHADGNEEG LATWVEQHLL PLRGLTPEQV 

       130        140        150        160        170        180 
RQRLPPLWAR LDRASLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD 

       190        200        210        220        230        240 
IGHRPTAASY QRLIAPESAD EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK 

       250        260        270        280        290        300 
WDGIRAQVVK RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE 

       310        320        330        340        350        360 
LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG EDWRSRPQHE RRSQLEHLVD 

       370        380        390        400        410        420 
EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ REALYGVGRT KDMGIWWKWK 

       430        440        450        460        470        480 
IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDAPAGTPG RALVPFAKAY SGLSDEEMRK 

       490        500        510        520        530        540 
VDAIIRKTTV ETFGPVRSVT PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE 

       550 
ADDLATLQAL LA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE015451 Genomic DNA. Translation: AAN66730.1.
RefSeqNP_743266.1. NC_002947.3.

3D structure databases

ProteinModelPortalQ88NU9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING160488.PP_1105.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAN66730; AAN66730; PP_1105.
GeneID1045250.
KEGGppu:PP_1105.
PATRIC19940370. VBIPsePut30601_1171.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycPPUT160488:GIXO-1137-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ88NU9_PSEPK
AccessionPrimary (citable) accession number: Q88NU9
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)