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Protein
Submitted name:

3-carboxy-cis,cis-muconate cycloisomerase

Gene

pcaB

Organism
Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Names & Taxonomyi

Protein namesi
Submitted name:
3-carboxy-cis,cis-muconate cycloisomeraseImported (EC:5.5.1.2Imported)
Gene namesi
Name:pcaBImported
Ordered Locus Names:PP_1379Imported
OrganismiPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_1379.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RE5X-ray2.60A/B/C/D1-450[»]
ProteinModelPortaliQ88N37.
SMRiQ88N37.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ88N37.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini363 – 442ADSL_CInterPro annotationAdd BLAST80

Phylogenomic databases

eggNOGiENOG4107RAW. Bacteria.
COG0015. LUCA.
HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR012789. Protocat_PcaB.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR02426. protocat_pcaB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q88N37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNQLFDAYF TAPAMREIFS DRGRLQGMLD FEAALARAEA SAGLVPHSAV
60 70 80 90 100
AAIEAACQAE RYDVGALANA IATAGNSAIP LVKALGKVIA TGVPEAERYV
110 120 130 140 150
HLGATSQDAM DTGLVLQLRD ALDLIEADLG KLADTLSQQA LKHADTPLVG
160 170 180 190 200
RTWLQHATPV TLGMKLAGVL GALTRHRQRL QELRPRLLVL QFGGASGSLA
210 220 230 240 250
ALGSKAMPVA EALAEQLKLT LPEQPWHTQR DRLVEFASVL GLVAGSLGKF
260 270 280 290 300
GRDISLLMQT EAGEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRVPG
310 320 330 340 350
LLSTLFAAMP QEHERSLGLW HAEWETLPDI CCLVSGALRQ AQVIAEGMEV
360 370 380 390 400
DAARMRRNLD LTQGLVLAEA VSIVLAQRLG RDRAHHLLEQ CCQRAVAEQR
410 420 430 440 450
HLRAVLGDEP QVSAELSGEE LDRLLDPAHY LGQARVWVAR AVSEHQRFTA
Length:450
Mass (Da):48,194
Last modified:June 1, 2003 - v1
Checksum:i4D3F7D437C944B93
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67002.1.
RefSeqiNP_743538.1. NC_002947.4.
WP_010952487.1. NC_002947.4.

Genome annotation databases

GeneIDi1043939.
KEGGippu:PP_1379.
PATRICi19940969. VBIPsePut30601_1463.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67002.1.
RefSeqiNP_743538.1. NC_002947.4.
WP_010952487.1. NC_002947.4.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RE5X-ray2.60A/B/C/D1-450[»]
ProteinModelPortaliQ88N37.
SMRiQ88N37.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_1379.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1043939.
KEGGippu:PP_1379.
PATRICi19940969. VBIPsePut30601_1463.

Phylogenomic databases

eggNOGiENOG4107RAW. Bacteria.
COG0015. LUCA.
HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.

Miscellaneous databases

EvolutionaryTraceiQ88N37.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR012789. Protocat_PcaB.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR02426. protocat_pcaB. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ88N37_PSEPK
AccessioniPrimary (citable) accession number: Q88N37
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.