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Q88N37 (Q88N37_PSEPK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
3-carboxy-cis,cis-muconate cycloisomerase EMBL AAN67002.1
Gene names
Name:pcaB EMBL AAN67002.1
Ordered Locus Names:PP1379
ORF Names:PP_1379 EMBL AAN67002.1
OrganismPseudomonas putida (strain KT2440) [Complete proteome] [HAMAP]
Taxonomic identifier160488 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length450 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Molecular functionIsomerase EMBL AAN67002.1
   Technical term3D-structure PDB 1RE5
Complete proteome
Gene Ontology (GO)
   Biological processprotocatechuate catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular function3-carboxy-cis,cis-muconate cycloisomerase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q88N37 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 4D3F7D437C944B93

FASTA45048,194
        10         20         30         40         50         60 
MSNQLFDAYF TAPAMREIFS DRGRLQGMLD FEAALARAEA SAGLVPHSAV AAIEAACQAE 

        70         80         90        100        110        120 
RYDVGALANA IATAGNSAIP LVKALGKVIA TGVPEAERYV HLGATSQDAM DTGLVLQLRD 

       130        140        150        160        170        180 
ALDLIEADLG KLADTLSQQA LKHADTPLVG RTWLQHATPV TLGMKLAGVL GALTRHRQRL 

       190        200        210        220        230        240 
QELRPRLLVL QFGGASGSLA ALGSKAMPVA EALAEQLKLT LPEQPWHTQR DRLVEFASVL 

       250        260        270        280        290        300 
GLVAGSLGKF GRDISLLMQT EAGEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRVPG 

       310        320        330        340        350        360 
LLSTLFAAMP QEHERSLGLW HAEWETLPDI CCLVSGALRQ AQVIAEGMEV DAARMRRNLD 

       370        380        390        400        410        420 
LTQGLVLAEA VSIVLAQRLG RDRAHHLLEQ CCQRAVAEQR HLRAVLGDEP QVSAELSGEE 

       430        440        450 
LDRLLDPAHY LGQARVWVAR AVSEHQRFTA

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440."
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O. expand/collapse author list , Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B., Fraser C.M.
Environ. Microbiol. 4:799-808(2002) [PubMed: 12534463] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Crystal structure of 3-carboxy-cis,cis-muconate lactonizing enzyme from Pseudomonas putida, a fumarase class II type cycloisomerase: enzyme evolution in parallel pathways."
Yang J., Wang Y., Woolridge E.M., Arora V., Petsko G.A., Kozarich J.W., Ringe D.
Biochemistry 43:10424-10434(2004) [PubMed: 15301541] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE015451 Genomic DNA. Translation: AAN67002.1.
RefSeqNP_743538.1. NC_002947.3.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1RE5X-ray2.60A/B/C/D1-450[»]
ProteinModelPortalQ88N37.
SMRQ88N37. Positions 3-450.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ88N37.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1043939.
GenomeReviewsGene locus PP1379 in contig AE015451_GR.
KEGGppu:PP_1379.
NMPDRfig|160488.1.peg.1368.
PATRIC19940969. VBIPsePut30601_1463.
TIGRPP1379.

Phylogenomic databases

eggNOGCOG0015.
HOGENOMHBG499008.
OMAHRATPMI.
PhylomeDBQ88N37.
ProtClustDBPRK09053.

Enzyme and pathway databases

BioCycPPUT160488:PP_1379-MONOMER.

Family and domain databases

InterProIPR019468. AdenyloSucc_lyase_C.
IPR003031. D_crystallin.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR024083. L-Aspartase-like_N.
IPR022761. Lyase1_N.
IPR012789. Protocat_PcaB.
[Graphical view]
Gene3DG3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KOK01857.
PfamPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SMARTSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR02426. Protocat_pcaB. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ88N37_PSEPK
AccessionPrimary (citable) accession number: Q88N37
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 25, 2012
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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