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Protein
Submitted name:

Hydrolase, isochorismatase family

Gene

PP_1826

Organism
Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-1856-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Hydrolase, isochorismatase familyImported
Gene namesi
Ordered Locus Names:PP_1826Imported
OrganismiPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_1826.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4H17X-ray1.60A/B1-196[»]
ProteinModelPortaliQ88LV1.
SMRiQ88LV1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 187IsochorismataseInterPro annotationAdd BLAST163

Phylogenomic databases

eggNOGiENOG4108ZV3. Bacteria.
COG1335. LUCA.
HOGENOMiHOG000078670.
OMAiMADNFAT.

Family and domain databases

Gene3Di3.40.50.850. 1 hit.
InterProiIPR000868. Isochorismatase-like.
[Graphical view]
PfamiPF00857. Isochorismatase. 1 hit.
[Graphical view]
SUPFAMiSSF52499. SSF52499. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88LV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVPTTMFRL TGRDYPPAKL SHASLIIIDA QKEYLSGPLK LSGMDEAVAN
60 70 80 90 100
IARLLDAARK SGRPIIHVRH LGTVGGRFDP QGPAGQFIPG LEPLEGEIVI
110 120 130 140 150
EKRMPNAFKN TKLHETLQEL GHLDLIVCGF MSHSSVSTTV RRAKDYGYRC
160 170 180 190
TLVEDASATR DLAFKDGVIP AAQIHQCEMA VMADNFACVA PTASLI
Length:196
Mass (Da):21,284
Last modified:June 1, 2003 - v1
Checksum:iE05DD7BC07AD83B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67445.1.
RefSeqiNP_743981.1. NC_002947.4.
WP_003252796.1. NC_002947.4.

Genome annotation databases

GeneIDi1043275.
KEGGippu:PP_1826.
PATRICi19941904. VBIPsePut30601_1926.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67445.1.
RefSeqiNP_743981.1. NC_002947.4.
WP_003252796.1. NC_002947.4.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4H17X-ray1.60A/B1-196[»]
ProteinModelPortaliQ88LV1.
SMRiQ88LV1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_1826.

Protocols and materials databases

DNASUi1043275.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1043275.
KEGGippu:PP_1826.
PATRICi19941904. VBIPsePut30601_1926.

Phylogenomic databases

eggNOGiENOG4108ZV3. Bacteria.
COG1335. LUCA.
HOGENOMiHOG000078670.
OMAiMADNFAT.

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-1856-MONOMER.

Family and domain databases

Gene3Di3.40.50.850. 1 hit.
InterProiIPR000868. Isochorismatase-like.
[Graphical view]
PfamiPF00857. Isochorismatase. 1 hit.
[Graphical view]
SUPFAMiSSF52499. SSF52499. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ88LV1_PSEPK
AccessioniPrimary (citable) accession number: Q88LV1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.