Q88LV1 (Q88LV1_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hydrolase, isochorismatase family EMBL AAN67445.1

Gene names

Ordered Locus Names:

PP_1826 EMBL AAN67445.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP] EMBL AAN67445.1

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas putida group › Pseudomonas putida

Protein attributes

Sequence length	196 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAN67445.1
Technical term	3D-structure PDB 4H17 Complete proteome
Gene Ontology (GO)
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88LV1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: E05DD7BC07AD83B5	FASTA	196	21,284
	10 20 30 40 50 60 MSVPTTMFRL TGRDYPPAKL SHASLIIIDA QKEYLSGPLK LSGMDEAVAN IARLLDAARK 70 80 90 100 110 120 SGRPIIHVRH LGTVGGRFDP QGPAGQFIPG LEPLEGEIVI EKRMPNAFKN TKLHETLQEL 130 140 150 160 170 180 GHLDLIVCGF MSHSSVSTTV RRAKDYGYRC TLVEDASATR DLAFKDGVIP AAQIHQCEMA 190 VMADNFACVA PTASLI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O. , Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT2440.
[2]	"Crystal structure of an isochorismatase (PP1826) from Pseudomonas putida KT2440 at 1.60 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (SEP-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE015451 Genomic DNA. Translation: AAN67445.1.

RefSeq

NP_743981.1. NC_002947.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4H17	X-ray	1.60	A/B	1-196	[»]

ProteinModelPortal

Q88LV1.

ModBase

Search...

Protein-protein interaction databases

STRING

160488.PP_1826.

Protocols and materials databases

DNASU

1043275.

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

AAN67445; AAN67445; PP_1826.

GeneID

1043275.

KEGG

ppu:PP_1826.

PATRIC

19941904. VBIPsePut30601_1926.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

COG1335.

HOGENOM

HOG000078670.

OMA

MAIMADN.

ProtClustDB

CLSK866732.

Enzyme and pathway databases

BioCyc

PPUT160488:GIXO-1827-MONOMER.

Family and domain databases

Gene3D

3.40.50.850. 1 hit.

InterPro

IPR000868. Isochorismatase-like.
[Graphical view]

Pfam

PF00857. Isochorismatase. 1 hit.
[Graphical view]

SUPFAM

SSF52499. Iscrsm_hydrolase. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q88LV1_PSEPK

Accession

Primary (citable) accession number: Q88LV1

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)