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Protein
Submitted name:

Aromatic-amino-acid aminotransferase

Gene

tyrB

Organism
Pseudomonas putida (strain KT2440)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-2024-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aromatic-amino-acid aminotransferaseImported (EC:2.6.1.1Imported, EC:2.6.1.5Imported)
Gene namesi
Name:tyrBImported
Ordered Locus Names:PP_1972Imported
OrganismiPseudomonas putida (strain KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_1972.

Structurei

3D structure databases

ProteinModelPortaliQ88LG1.
SMRiQ88LG1. Positions 3-398.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 394367Aminotran_1_2InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili306 – 33328Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q88LG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLFSAVELA PRDPILGLNE AFNADPRTDK VNLGVGVYCN EEGRIPLLRA
60 70 80 90 100
VIEAETQRAA QHASRGYLPI DGIATYDQAV QKLLFGAESP LLAAGRVVTV
110 120 130 140 150
QAVGGTGALK IGADFLKRLS PNAVVAISDP SWENHRALFE SAGFPVQTYR
160 170 180 190 200
YYDAPTNDVN RAGMLEDLNA LPSGSIVVLH ACCHNPTGVD LNLDDWKNVL
210 220 230 240 250
EVVKAKGHVP FLDMAYQGFG DGIAEDAFAV RLFAESGLEF FVSSSFSKSF
260 270 280 290 300
SLYGERVGAL SIVTASKDES TRVLSQVKRV IRTTYSNPPT HGATIVATVL
310 320 330 340 350
NSAELRQMWE TELAEMRERI HGMRKQMVSL LAEYGANRDF SFVGRQVGMF
360 370 380 390
SYSGLTVEQV TRLKNDFGIY ALDTGRIAVA ALNQSNIHVV TKAIVEVL
Length:398
Mass (Da):43,290
Last modified:June 1, 2003 - v1
Checksum:iCD979E298E9B2D70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67587.1.
RefSeqiNP_744123.1. NC_002947.4.
WP_010952990.1. NC_002947.4.

Genome annotation databases

EnsemblBacteriaiAAN67587; AAN67587; PP_1972.
GeneIDi1043062.
KEGGippu:PP_1972.
PATRICi19942228. VBIPsePut30601_2081.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67587.1.
RefSeqiNP_744123.1. NC_002947.4.
WP_010952990.1. NC_002947.4.

3D structure databases

ProteinModelPortaliQ88LG1.
SMRiQ88LG1. Positions 3-398.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_1972.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN67587; AAN67587; PP_1972.
GeneIDi1043062.
KEGGippu:PP_1972.
PATRICi19942228. VBIPsePut30601_2081.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-2024-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT2440Imported.

Entry informationi

Entry nameiQ88LG1_PSEPK
AccessioniPrimary (citable) accession number: Q88LG1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 8, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.