Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative tRNA-(Ms(2)io(6)a)-hydroxylase

Gene

PP_2188

Organism
Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi38Iron 1Combined sources1
Metal bindingi69Iron 1Combined sources1
Metal bindingi69Iron 2Combined sources1
Metal bindingi72Iron 1; via pros nitrogenCombined sources1
Metal bindingi122Iron 2Combined sources1
Metal bindingi151Iron 2Combined sources1
Metal bindingi154Iron 2; via pros nitrogenCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

IronCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-2230-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative tRNA-(Ms(2)io(6)a)-hydroxylaseImported
Gene namesi
Ordered Locus Names:PP_2188Imported
OrganismiPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_2188.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ITBX-ray2.05A/B1-205[»]
ProteinModelPortaliQ88KV1.
SMRiQ88KV1.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ88KV1.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105FR9. Bacteria.
COG4445. LUCA.
HOGENOMiHOG000276503.
KOiK06169.
OMAiCEFKAAS.

Family and domain databases

CDDicd07910. MiaE. 1 hit.
Gene3Di1.20.1260.10. 1 hit.
InterProiIPR009078. Ferritin-like_SF.
IPR012347. Ferritin-rel.
IPR010386. tRNA-Hydrxlase_MiaE.
[Graphical view]
PfamiPF06175. MiaE. 2 hits.
[Graphical view]
PIRSFiPIRSF020736. MiaE. 1 hit.
SUPFAMiSSF47240. SSF47240. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88KV1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLIPEIDAF LGCPTPDAWI EAALADQETL LIDHKNCEFK AASTALSLIA
60 70 80 90 100
KYNTHLDLIN MMSRLAREEL VHHEQVLRLM KRRGVPLRPV SAGRYASGLR
110 120 130 140 150
RLVRAHEPVK LVDTLVVGAF IEARSCERFA ALVPHLDEEL GRFYHGLLKS
160 170 180 190 200
EARHYQGYLK LAHNYGDEAD IARCVELVRA AEMELIQSPD QELRFHSGIP

QALAA
Length:205
Mass (Da):23,031
Last modified:June 1, 2003 - v1
Checksum:iDA044B40D55EA197
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67801.1.
RefSeqiNP_744337.1. NC_002947.4.
WP_010953173.1. NC_002947.4.

Genome annotation databases

GeneIDi1045049.
KEGGippu:PP_2188.
PATRICi19942702. VBIPsePut30601_2307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN67801.1.
RefSeqiNP_744337.1. NC_002947.4.
WP_010953173.1. NC_002947.4.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ITBX-ray2.05A/B1-205[»]
ProteinModelPortaliQ88KV1.
SMRiQ88KV1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_2188.

Protocols and materials databases

DNASUi1045049.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1045049.
KEGGippu:PP_2188.
PATRICi19942702. VBIPsePut30601_2307.

Phylogenomic databases

eggNOGiENOG4105FR9. Bacteria.
COG4445. LUCA.
HOGENOMiHOG000276503.
KOiK06169.
OMAiCEFKAAS.

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-2230-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ88KV1.

Family and domain databases

CDDicd07910. MiaE. 1 hit.
Gene3Di1.20.1260.10. 1 hit.
InterProiIPR009078. Ferritin-like_SF.
IPR012347. Ferritin-rel.
IPR010386. tRNA-Hydrxlase_MiaE.
[Graphical view]
PfamiPF06175. MiaE. 2 hits.
[Graphical view]
PIRSFiPIRSF020736. MiaE. 1 hit.
SUPFAMiSSF47240. SSF47240. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ88KV1_PSEPK
AccessioniPrimary (citable) accession number: Q88KV1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 30, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.