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Protein
Submitted name:

Mg-dependent cytoplasmic DNase / RNase

Gene

tatD

Organism
Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi97ZincCombined sources1
Metal bindingi133Zinc; via pros nitrogenCombined sources1
Metal bindingi158Zinc; via tele nitrogenCombined sources1

GO - Molecular functioni

Keywordsi

Molecular functionHydrolaseImported
LigandMetal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciPPUT160488:G1G01-2472-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Mg-dependent cytoplasmic DNase / RNaseImported (EC:3.1.21.-Imported)
Gene namesi
Name:tatDImported
Ordered Locus Names:PP_2311Imported
OrganismiPseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000556 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ88KH9

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_2311

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3RCMX-ray2.05A1-265[»]
ProteinModelPortaliQ88KH9
SMRiQ88KH9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105F8V Bacteria
COG0084 LUCA
HOGENOMiHOG000201523
KOiK03424
OMAiETDGPWC

Family and domain databases

CDDicd01310 TatD_DNAse, 1 hit
InterProiView protein in InterPro
IPR018228 DNase_TatD-rel_CS
IPR032466 Metal_Hydrolase
IPR001130 TatD_family
PANTHERiPTHR10060 PTHR10060, 1 hit
PfamiView protein in Pfam
PF01026 TatD_DNase, 1 hit
PIRSFiPIRSF005902 DNase_TatD, 1 hit
SUPFAMiSSF51556 SSF51556, 1 hit
PROSITEiView protein in PROSITE
PS01090 TATD_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q88KH9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLIDIGVNL TNSSFHDQQA AIVERALEAG VTQMLLTGTS LAVSEQALEL
60 70 80 90 100
CQQLDASGAH LFATAGVHPH DAKAWDTDSE RQLRLLLSEP RVRAVGECGL
110 120 130 140 150
DFNRDFSPRP LQEKALEAQL TLAAQLRLPV FLHERDASER LLAILKDYRD
160 170 180 190 200
HLTGAVVHCF TGEREALFAY LDLDLHIGIT GWICDERRGT HLHPLVGNIP
210 220 230 240 250
EGRLMLESDA PYLLPRSLRP KPKSGRNEPA FLPEVLREVA LHRGESAEHT
260
AAHTTATARD FFQLP
Length:265
Mass (Da):29,409
Last modified:June 1, 2003 - v1
Checksum:i423EB51494335FDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA Translation: AAN67924.1
RefSeqiNP_744460.1, NC_002947.4
WP_010953279.1, NC_002947.4

Genome annotation databases

EnsemblBacteriaiAAN67924; AAN67924; PP_2311
GeneIDi1045298
KEGGippu:PP_2311
PATRICifig|160488.4.peg.2448

Similar proteinsi

Entry informationi

Entry nameiQ88KH9_PSEPK
AccessioniPrimary (citable) accession number: Q88KH9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

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