Q88ID3 (Q88ID3_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyocin R2_PP, lytic enzyme EMBL AAN68674.1

Gene names

Ordered Locus Names:	PP3066
ORF Names:	PP_3066 EMBL AAN68674.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP]

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	183 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88ID3 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: DB57E2ACC0D72DB3	FASTA	183	20,148
	10 20 30 40 50 60 MAISVQQLQQ ILPNAGRKAG VYVPGLNATM GKFAIITRLR MAAFLAQIGH ESGQLQYVRE 70 80 90 100 110 120 LGNDKYLSKY DTGRLAERLG NTPEADGDGQ LYRGRGLIQV TGRFNYEACS EALFGDGRLL 130 140 150 160 170 180 NTPELLEHPV YASMSAGWFW QKEGLNSLAD KGDILAITKR INGGSNGLED RKALYKRALE VLQ

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O. , Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed: 12534463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015451 Genomic DNA. Translation: AAN68674.1.
RefSeq	NP_745210.1. NC_002947.3.
3D structure databases
HSSP	HSSP built from PDB template 1DXJ based on UniProtKB O81934.
ProteinModelPortal	Q88ID3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q88ID3.
Protein family/group databases
CAZy	GH19. Glycoside Hydrolase Family 19.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1043584.
GenomeReviews	Gene locus PP3066 in contig AE015451_GR.
KEGG	ppu:PP_3066.
NMPDR	fig|160488.1.peg.3040.
PATRIC	19944580. VBIPsePut30601_3235.
TIGR	PP3066.
Phylogenomic databases
eggNOG	COG3179.
HOGENOM	HBG673873.
OMA	EACSEAL.
ProtClustDB	CLSK909154.
Enzyme and pathway databases
BioCyc	PPUT160488:PP_3066-MONOMER.
Family and domain databases
InterPro	IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
KO	K03791.
Pfam	PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q88ID3_PSEPK

Accession

Primary (citable) accession number: Q88ID3

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)