Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glycogen synthase

Gene

glgA

Organism
Pseudomonas putida (strain KT2440)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei57 – 571ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-4129-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:PP_4050
OrganismiPseudomonas putida (strain KT2440)
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000556 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 519519Glycogen synthasePRO_0000188633Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_4050.

Structurei

3D structure databases

ProteinModelPortaliQ88FN9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPFWRPDI.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88FN9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MISAAVEPHV DAFKPDNREP LTPDFATTGK APGAQRQHNP NKRKILFVTS
60 70 80 90 100
EIADLVKTGG LGDVSAALPR ALAHLHDVRV LIPGYRQVME SDNPIHIVGE
110 120 130 140 150
LGGHAALPPC KIGRMDMADG LVIYVLICPE LYQRDGTPYG ANNGRDWPDN
160 170 180 190 200
HIRFARLGLA AAEIAAGEGK IHWTPEVVHA HDWPAGLAPA YMHWRGLNTP
210 220 230 240 250
TLFTIHNLAY QGVYSRGCSP ELAIPEHAMQ QEGMEFYGKL SFLKAGLAYS
260 270 280 290 300
SHITTVSATY AREITTPEFG CGLDGFLASK AQQGLLGGIP NGIDESWDSA
310 320 330 340 350
TDKHLQHNFS INDWEGKARN TQEVRELFGL DDSEGPLFAV VSRLVYQKGL
360 370 380 390 400
DLTLGVADYI VEQGGQIAII GRGEPEEEQA MRELALRHPG RIGVRIGFNE
410 420 430 440 450
TDARRMFAGS DFLLMPSRYE PCGLSQMYAQ RFGSLPVARN TGGLADTIEC
460 470 480 490 500
GVTGFLFNES TVESYREALS RAFYVYGKKD LLNAMRCLSM TQPFNWCQAV
510
EPYARLYEDL VKQTQLSHY
Length:519
Mass (Da):57,191
Last modified:June 1, 2003 - v1
Checksum:i33BCDF945EAD883D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN69640.1.
RefSeqiNP_746176.1. NC_002947.3.
WP_010954845.1. NC_002947.3.

Genome annotation databases

EnsemblBacteriaiAAN69640; AAN69640; PP_4050.
GeneIDi1042113.
KEGGippu:PP_4050.
PATRICi19946718. VBIPsePut30601_4303.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN69640.1.
RefSeqiNP_746176.1. NC_002947.3.
WP_010954845.1. NC_002947.3.

3D structure databases

ProteinModelPortaliQ88FN9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_4050.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN69640; AAN69640; PP_4050.
GeneIDi1042113.
KEGGippu:PP_4050.
PATRICi19946718. VBIPsePut30601_4303.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPFWRPDI.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciPPUT160488:GIXO-4129-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT2440.

Entry informationi

Entry nameiGLGA_PSEPK
AccessioniPrimary (citable) accession number: Q88FN9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: June 1, 2003
Last modified: May 27, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.