Q88FF2 (Q88FF2_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Membrane-bound lytic murein transglycosylase D EMBL AAN69727.1

Gene names

Name:	mltD EMBL AAN69727.1
Ordered Locus Names:	PP4145
ORF Names:	PP_4145 EMBL AAN69727.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP]

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	476 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	lytic transglycosylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88FF2 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: B238E68359DE6DDD	FASTA	476	52,856
	10 20 30 40 50 60 MSSRSRRTSH SVALTRLAQI SALALAATLV GCQSTRQLDE SDSVRAHNYQ ARIKHKPSPL 70 80 90 100 110 120 LVKPAEQAPQ DVWERMRQGF ALQDSIDVNP RIEQQRLWFA SNPTFIESAG ERGSLYLHYI 130 140 150 160 170 180 VERLEERDMP LELALLPAIE SAYNPMAYSR ASAAGMWQFM PATGRHFNLR QTNFYDGRRD 190 200 210 220 230 240 VTASTNAALD YLTRLHDMFN GDWLLALAAY NAGEGTVSRA IERNERLGLP TDYWNLPLPQ 250 260 270 280 290 300 ETRDYVPKLL ALSQVVSTPE AYGVNLTPIA NEPYFEAVAI NDRLDLSRVA AFANIDEDEL 310 320 330 340 350 360 IQLNPAFKKR MTVDGPKQLL VPTAKAQLLS ASLSNLNPEQ LVSLQPPKAA FARAVAEAKA 370 380 390 400 410 420 PVGARSYRVK RGDNLSAIAK ANRVSVKDIK RWNRLSGNSL RAGQVLALRG GSAPSAAGNR 430 440 450 460 470 VAASGKRSTQ YKVRKGDSLY LVAKRFNVEM KHLKRWNPRS GHALKPGQTL TVYLGR

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O. , Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed: 12534463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015451 Genomic DNA. Translation: AAN69727.1.
RefSeq	NP_746263.1. NC_002947.3.
3D structure databases
HSSP	HSSP built from PDB template 1E0G based on UniProtKB P23931.
ProteinModelPortal	Q88FF2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q88FF2.
Protein family/group databases
CAZy	GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1042314.
GenomeReviews	Gene locus PP4145 in contig AE015451_GR.
KEGG	ppu:PP_4145.
NMPDR	fig|160488.1.peg.4093.
PATRIC	19946924. VBIPsePut30601_4405.
TIGR	PP4145.
Phylogenomic databases
eggNOG	COG0741.
HOGENOM	HBG519241.
OMA	SLYLHYI.
PhylomeDB	Q88FF2.
ProtClustDB	CLSK866801.
Enzyme and pathway databases
BioCyc	PPUT160488:PP_4145-MONOMER.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR010511. MltD_lipid-attach. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. IPR000189. Transglyc_AS. [Graphical view]
KO	K08307.
Pfam	PF01476. LysM. 2 hits. PF06474. MLTD_N. 1 hit. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS00922. TRANSGLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q88FF2_PSEPK

Accession

Primary (citable) accession number: Q88FF2

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)