Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Cytochrome c-type biogenesis protein CcmF

Gene

ccmF

Organism
Pseudomonas putida (strain KT2440)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. heme binding Source: InterPro
  2. heme transporter activity Source: InterPro

GO - Biological processi

  1. cytochrome complex assembly Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-4402-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c-type biogenesis protein CcmFImported
Gene namesi
Name:ccmFImported
Ordered Locus Names:PP_4322Imported
OrganismiPseudomonas putida (strain KT2440)Imported
Taxonomic identifieri160488 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000556 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi160488.PP_4322.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1138.
HOGENOMiHOG000274659.
KOiK02198.
OMAiEKRFYTV.
OrthoDBiEOG6RRKJ4.

Family and domain databases

InterProiIPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
IPR003568. Cyt_c_biogenesis_CcmF.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 1 hit.
PfamiPF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.
PR01411. CCMFBIOGNSIS.
TIGRFAMsiTIGR00353. nrfE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88EY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAALVVPEL GQLAMILAIC FAVVQASVPL LGAWRGDSLW MSLARPAAWG
60 70 80 90 100
QFAFLAFAFA CLTHAFMTDN FSVAYVASNS NSALPWYYKF SAVWGAHEGS
110 120 130 140 150
LLLWALILGG WTFAVSVFSR QLPQVMLARV LAVMGMISVG FLSFLIITSN
160 170 180 190 200
PFQRLLPQVP TDGRDLNPLL QDFGLIVHPP MLYMGYVGFS VAFAFAIAAL
210 220 230 240 250
LGGRLDAAWA RWSRPWTIVA WAFLGVGITL GSWWAYYELG WGGWWFWDPV
260 270 280 290 300
ENASFMPWLV GTALIHSLAV TEKRGVFKSW TVLLAIAAFS LSLLGTFLVR
310 320 330 340 350
SGVLTSVHAF AADPSRGIFI LFFLLFVVGG SLTLFALRAP VVKSQVGFAL
360 370 380 390 400
WSRETLLLAN NLVLVVAASM ILLGTLYPLV LDALTGAKLS VGPPYFDALF
410 420 430 440 450
LPLMALLMVV LSVGVVVRWK DTPGKWLVSM MTPVLIGSAI LAPVAGFIVD
460 470 480 490 500
DFDWPTLTAF ALAAWVVLGG LRDIFDKTRH KGLVKGLPGL GRSYWGMQLA
510 520 530 540 550
HLGLAVCALG VVLSSNNSAE RDLRMAPGES VELGGYHFLF QGAKHFEGPN
560 570 580 590 600
FISDKGTIVV SREGREVTTL YPEKRLYTVQ QSMMTEAGID AGFTRDLYVA
610 620 630 640 650
LGEPLENGAW AVRVHIKPYV RWIWLGGLLT GLGGLLAALD RRYRVKVKTR
660
VRDVLGVSGA AA
Length:662
Mass (Da):72,090
Last modified:May 31, 2003 - v1
Checksum:iC31CF87B8D8FA5C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN69901.1.
RefSeqiNP_746437.1. NC_002947.3.

Genome annotation databases

EnsemblBacteriaiAAN69901; AAN69901; PP_4322.
GeneIDi1041632.
KEGGippu:PP_4322.
PATRICi19947306. VBIPsePut30601_4596.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE015451 Genomic DNA. Translation: AAN69901.1.
RefSeqiNP_746437.1. NC_002947.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160488.PP_4322.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN69901; AAN69901; PP_4322.
GeneIDi1041632.
KEGGippu:PP_4322.
PATRICi19947306. VBIPsePut30601_4596.

Phylogenomic databases

eggNOGiCOG1138.
HOGENOMiHOG000274659.
KOiK02198.
OMAiEKRFYTV.
OrthoDBiEOG6RRKJ4.

Enzyme and pathway databases

BioCyciPPUT160488:GIXO-4402-MONOMER.

Family and domain databases

InterProiIPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
IPR003568. Cyt_c_biogenesis_CcmF.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 1 hit.
PfamiPF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.
PR01411. CCMFBIOGNSIS.
TIGRFAMsiTIGR00353. nrfE. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KT2440Imported.

Entry informationi

Entry nameiQ88EY0_PSEPK
AccessioniPrimary (citable) accession number: Q88EY0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2003
Last sequence update: May 31, 2003
Last modified: March 31, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.