Q88EY0 (Q88EY0_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cytochrome c-type biogenesis protein CcmF EMBL AAN69901.1

Gene names

Name:	ccmF EMBL AAN69901.1
Ordered Locus Names:	PP_4322 EMBL AAN69901.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP] EMBL AAN69901.1

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas putida group › Pseudomonas putida

Protein attributes

Sequence length	662 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cytochrome complex assembly Inferred from electronic annotation. Source: InterPro respiratory chain complex IV assembly Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	heme transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88EY0 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: C31CF87B8D8FA5C0	FASTA	662	72,090
	10 20 30 40 50 60 MNAALVVPEL GQLAMILAIC FAVVQASVPL LGAWRGDSLW MSLARPAAWG QFAFLAFAFA 70 80 90 100 110 120 CLTHAFMTDN FSVAYVASNS NSALPWYYKF SAVWGAHEGS LLLWALILGG WTFAVSVFSR 130 140 150 160 170 180 QLPQVMLARV LAVMGMISVG FLSFLIITSN PFQRLLPQVP TDGRDLNPLL QDFGLIVHPP 190 200 210 220 230 240 MLYMGYVGFS VAFAFAIAAL LGGRLDAAWA RWSRPWTIVA WAFLGVGITL GSWWAYYELG 250 260 270 280 290 300 WGGWWFWDPV ENASFMPWLV GTALIHSLAV TEKRGVFKSW TVLLAIAAFS LSLLGTFLVR 310 320 330 340 350 360 SGVLTSVHAF AADPSRGIFI LFFLLFVVGG SLTLFALRAP VVKSQVGFAL WSRETLLLAN 370 380 390 400 410 420 NLVLVVAASM ILLGTLYPLV LDALTGAKLS VGPPYFDALF LPLMALLMVV LSVGVVVRWK 430 440 450 460 470 480 DTPGKWLVSM MTPVLIGSAI LAPVAGFIVD DFDWPTLTAF ALAAWVVLGG LRDIFDKTRH 490 500 510 520 530 540 KGLVKGLPGL GRSYWGMQLA HLGLAVCALG VVLSSNNSAE RDLRMAPGES VELGGYHFLF 550 560 570 580 590 600 QGAKHFEGPN FISDKGTIVV SREGREVTTL YPEKRLYTVQ QSMMTEAGID AGFTRDLYVA 610 620 630 640 650 660 LGEPLENGAW AVRVHIKPYV RWIWLGGLLT GLGGLLAALD RRYRVKVKTR VRDVLGVSGA AA

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O. , Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT2440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015451 Genomic DNA. Translation: AAN69901.1.
RefSeq	NP_746437.1. NC_002947.3.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	160488.PP_4322.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAN69901; AAN69901; PP_4322.
GeneID	1041632.
KEGG	ppu:PP_4322.
PATRIC	19947306. VBIPsePut30601_4596.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1138.
HOGENOM	HOG000274659.
KO	K02198.
OMA	CLTYAFM.
ProtClustDB	CLSK866595.
Enzyme and pathway databases
BioCyc	PPUT160488:GIXO-4323-MONOMER.
Family and domain databases
InterPro	IPR002541. Cyt_c_assembly. IPR003567. Cyt_c_biogenesis. IPR003568. Cyt_c_biogenesis_CcmF. [Graphical view]
Pfam	PF01578. Cytochrom_C_asm. 1 hit. [Graphical view]
PRINTS	PR01410. CCBIOGENESIS. PR01411. CCMFBIOGNSIS.
TIGRFAMs	TIGR00353. nrfE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q88EY0_PSEPK

Accession

Primary (citable) accession number: Q88EY0

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)