Q88DF8 (Q88DF8_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein EMBL AAN70436.1

Gene names

Ordered Locus Names:	PP4867
ORF Names:	PP_4867 EMBL AAN70436.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP]

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	378 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	amino acid transport Inferred from electronic annotation. Source: InterPro
Cellular component	outer membrane-bounded periplasmic space Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88DF8 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 5E3A245B7EB44DE9	FASTA	378	40,271
	10 20 30 40 50 60 MSQTFYKKGF LALAVATALG VSSYVQADVK IGVAGPMTGA NAAFGEQYMK GAQAAADKIN 70 80 90 100 110 120 AAGGVNGEKI VLVKGDDACE PKQAVAVANR LVDQDKVIGV VGHFCSSNTI PASEVYDEAG 130 140 150 160 170 180 VIAITPGSTN PQVTERGLSA MFRMCGRDDQ QGIVAGDYIV DVLKGKKVAV LHDKDTYGQG 190 200 210 220 230 240 LADATKAQLE KRGVKPVLYE GLTRGEKDFS AVVTKIRSTG ADVVYFGGLH PEAGPLVRQL 250 260 270 280 290 300 REQGLKDVKF MSDDGIVTDE LVSTAGGAQY VDGVYMTFGA DPRLLPDSKA VVEEFRKAGT 310 320 330 340 350 360 EPEGYTLYAY ASLQALAAAF NGAKSNKGED AAKWLKANPV QTVMGEKKWD SKGDLTVSDY 370 VVYQWDKTGK YHQLEKQK

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R., Nelson W., White O. , Peterson J., Khouri H., Hance I., Chris Lee P., Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Dusterhoft A., Tummler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed: 12534463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015451 Genomic DNA. Translation: AAN70436.1.
RefSeq	NP_746972.1. NC_002947.3.
3D structure databases
HSSP	HSSP built from PDB template 2LIV based on UniProtKB P02917.
ProteinModelPortal	Q88DF8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q88DF8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1043170.
GenomeReviews	Gene locus PP4867 in contig AE015451_GR.
KEGG	ppu:PP_4867.
NMPDR	fig|160488.1.peg.4802.
PATRIC	19948534. VBIPsePut30601_5198.
TIGR	PP4867.
Phylogenomic databases
eggNOG	COG0683.
HOGENOM	HBG695960.
OMA	FEPEGYT.
PhylomeDB	Q88DF8.
ProtClustDB	CLSK868988.
Enzyme and pathway databases
BioCyc	PPUT160488:PP_4867-MONOMER.
Family and domain databases
InterPro	IPR001828. ANF_lig-bd_rcpt. IPR000709. Leu_Ile_Val-bd. [Graphical view]
KO	K01999.
Pfam	PF01094. ANF_receptor. 1 hit. [Graphical view]
PRINTS	PR00337. LEUILEVALBP.
ProtoNet	Search...

Entry information

Entry name

Q88DF8_PSEPK

Accession

Primary (citable) accession number: Q88DF8

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)