Q88C73 (Q88C73_PSEPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA helicase RecG EMBL AAN70875.1

Gene names

Name:	recG EMBL AAN70875.1
Ordered Locus Names:	PP_5310 EMBL AAN70875.1

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP] EMBL AAN70875.1

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas putida group › Pseudomonas putida

Protein attributes

Sequence length	692 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000452 EMBL AAN70875.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent DNA helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q88C73 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: BF70982016C3C5A7	FASTA	692	76,453
	10 20 30 40 50 60 MSELSKVPVT VLKGVGEAMA EKLAKVGLEN LQDVLFHLPL RYQDRTRVVP IGQLRPGQDA 70 80 90 100 110 120 VIEGVVSGAD VTMGKRRSLV VRLGDGSGVL TLRFYHFSNA QKEGLKRGTH LRCYGEARPG 130 140 150 160 170 180 ASGLEIYHPE YRALNGNEPP PPVEQTLTPI YPSTEGLTQQ RLRLLCQQSL ALLGPRSLPD 190 200 210 220 230 240 WLPDELARDY QLAPLDEAIR YLHNPPADAD LDELAEGQHW AQHRLAFEEL LTHQLSQQRL 250 260 270 280 290 300 RESLRSLRAP VLPRATRLQA QYLANLGFQP TGAQQRVANE IAYDLSQHEP MMRLVQGDVG 310 320 330 340 350 360 AGKTVVAALA ALQALEAGYQ VALMAPTEIL AEQHYITFKR WLEPLGIEVA WLAGKLKGKA 370 380 390 400 410 420 RAASLEQIAN GAPMVVGTHA LFQEEVRFKH LALAIIDEQH RFGVQQRLAL RRKGVAGELC 430 440 450 460 470 480 PHQLIMTATP IPRTLAMSAY ADLDTSVLDE LPPGRTPVNT VLVADSRRFE VVERVRAACA 490 500 510 520 530 540 EGRQAYWVCT LIEESEELTC QAAESTYEEL GSALGELKVG LIHGRMKPAE KAEIMAEFKA 550 560 570 580 590 600 GNLQLLVATT VIEVGVDVPN ASLMIIENPE RLGLAQLHQL RGRVGRGSAV SHCVLLYHPP 610 620 630 640 650 660 LSQIGRERLG IMRETNDGFI IAEKDLELRG PGEMLGTRQT GLLQFKVADL MRDADLLPAV 670 680 690 RDAAQALVSR WPEHVSPLLD RWLRHGQQYG QV

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O. , Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT2440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE015451 Genomic DNA. Translation: AAN70875.1.
RefSeq	NP_747411.1. NC_002947.3.
3D structure databases
ProteinModelPortal	Q88C73.
ModBase	Search...
Protein-protein interaction databases
STRING	160488.PP_5310.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAN70875; AAN70875; PP_5310.
GeneID	1042195.
KEGG	ppu:PP_5310.
PATRIC	19949468. VBIPsePut30601_5663.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1200.
HOGENOM	HOG000036617.
KO	K03655.
OMA	DRTRITP.
ProtClustDB	PRK10917.
Enzyme and pathway databases
BioCyc	PPUT160488:GIXO-5406-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR004609. ATP-dep_DNA_helicase_RecG. IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR012340. NA-bd_OB-fold. IPR027417. P-loop_NTPase. [Graphical view]
Pfam	PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF52540. SSF52540. 2 hits.
TIGRFAMs	TIGR00643. recG. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q88C73_PSEPK

Accession

Primary (citable) accession number: Q88C73

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 29, 2013
This is version 72 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)