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Q88B84 (Q88B84_PSESM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Catalytic activity

Peptidylproline (omega=180) = peptidylproline (omega=0).

Sequence similarities

Contains 1 PPIase FKBP-type domain. RuleBase RU004231

Ontologies

Keywords
   Molecular functionIsomerase
Rotamase RuleBase RU004231
   Technical term3D-structure PDB 3OE2
Complete proteome
Gene Ontology (GO)
   Biological_processprotein folding

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionpeptidyl-prolyl cis-trans isomerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q88B84 [UniParc].

Last modified June 1, 2003. Version 1.
Checksum: 9849CDC6FB98EE41

FASTA22424,215
        10         20         30         40         50         60 
MSRYLLTSLF LLLPLAQAAE APPDNDAHDL AYSLGASLGE RLHQEVPDLD LKALVDGLKQ 

        70         80         90        100        110        120 
AYQGKPLALK QERIDQILRE HDAAIAQAET AGTDAPTEAA LKAERTFMAG EKAKPGVKEL 

       130        140        150        160        170        180 
ADGILMTELT PGTGPKPDAN GRVEVRYVGR LPDGKIFDQS TQPQWFRLDS VISGWTSALQ 

       190        200        210        220 
NMPTGAKWRL VIPSDQAYGA EGAGDLIDPF TPLVFEIELI AVSQ 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000."
Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S., Brinkac L., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T., Zafar N. expand/collapse author list , Zhou L., Liu J., Yuan Q., Khouri H., Fedorova N., Tran B., Russell D., Berry K., Utterback T., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.
Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DC3000 EMBL AAO53689.1.
[2]"Crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000) at 1.6 resolution."
Zhang H.M., Li M., Gao Y., Chang W.
Submitted (AUG-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF 26-224.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016853 Genomic DNA. Translation: AAO53689.1.
RefSeqNP_789994.1. NC_004578.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3OE2X-ray1.60A26-224[»]
ProteinModelPortalQ88B84.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING223283.PSPTO_0135.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAO53689; AAO53689; PSPTO_0135.
GeneID1181743.
KEGGpst:PSPTO_0135.
PATRIC19991424. VBIPseSyr93040_0142.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0545.
HOGENOMHOG000154888.
KOK01802.
OMADSVIEGW.
OrthoDBEOG6DRPKW.
ProtClustDBCLSK869219.

Enzyme and pathway databases

BioCycPSYR223283:GJIX-134-MONOMER.

Family and domain databases

Gene3D1.10.287.460. 1 hit.
InterProIPR023566. PPIase_FKBP.
IPR001179. PPIase_FKBP_dom.
IPR000774. PPIase_FKBP_N.
[Graphical view]
PANTHERPTHR10516. PTHR10516. 1 hit.
PfamPF00254. FKBP_C. 1 hit.
PF01346. FKBP_N. 1 hit.
[Graphical view]
PROSITEPS50059. FKBP_PPIASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ88B84_PSESM
AccessionPrimary (citable) accession number: Q88B84
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: April 16, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)