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Protein

Peptidyl-prolyl cis-trans isomerase

Gene

PSPTO_0135

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

Peptidylproline (omega=180) = peptidylproline (omega=0).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Isomerase, RotamaseUniRule annotation

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-134-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Peptidyl-prolyl cis-trans isomeraseUniRule annotation (EC:5.2.1.8UniRule annotation)
Gene namesi
Ordered Locus Names:PSPTO_0135Imported
OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002515 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_0135.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3OE2X-ray1.60A26-224[»]
ProteinModelPortaliQ88B84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 PPIase FKBP-type domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0545.
HOGENOMiHOG000154888.
KOiK01802.
OMAiTGAKWRL.
OrthoDBiEOG6DRPKW.
PhylomeDBiQ88B84.

Family and domain databases

Gene3Di1.10.287.460. 1 hit.
InterProiIPR023566. PPIase_FKBP.
IPR001179. PPIase_FKBP_dom.
IPR000774. PPIase_FKBP_N.
[Graphical view]
PANTHERiPTHR10516. PTHR10516. 1 hit.
PfamiPF00254. FKBP_C. 1 hit.
PF01346. FKBP_N. 1 hit.
[Graphical view]
PROSITEiPS50059. FKBP_PPIASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q88B84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRYLLTSLF LLLPLAQAAE APPDNDAHDL AYSLGASLGE RLHQEVPDLD
60 70 80 90 100
LKALVDGLKQ AYQGKPLALK QERIDQILRE HDAAIAQAET AGTDAPTEAA
110 120 130 140 150
LKAERTFMAG EKAKPGVKEL ADGILMTELT PGTGPKPDAN GRVEVRYVGR
160 170 180 190 200
LPDGKIFDQS TQPQWFRLDS VISGWTSALQ NMPTGAKWRL VIPSDQAYGA
210 220
EGAGDLIDPF TPLVFEIELI AVSQ
Length:224
Mass (Da):24,215
Last modified:June 1, 2003 - v1
Checksum:i9849CDC6FB98EE41
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO53689.1.
RefSeqiNP_789994.1. NC_004578.1.
WP_005769477.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO53689; AAO53689; PSPTO_0135.
GeneIDi1181743.
KEGGipst:PSPTO_0135.
PATRICi19991424. VBIPseSyr93040_0142.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO53689.1.
RefSeqiNP_789994.1. NC_004578.1.
WP_005769477.1. NC_004578.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3OE2X-ray1.60A26-224[»]
ProteinModelPortaliQ88B84.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223283.PSPTO_0135.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO53689; AAO53689; PSPTO_0135.
GeneIDi1181743.
KEGGipst:PSPTO_0135.
PATRICi19991424. VBIPseSyr93040_0142.

Phylogenomic databases

eggNOGiCOG0545.
HOGENOMiHOG000154888.
KOiK01802.
OMAiTGAKWRL.
OrthoDBiEOG6DRPKW.
PhylomeDBiQ88B84.

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-134-MONOMER.

Family and domain databases

Gene3Di1.10.287.460. 1 hit.
InterProiIPR023566. PPIase_FKBP.
IPR001179. PPIase_FKBP_dom.
IPR000774. PPIase_FKBP_N.
[Graphical view]
PANTHERiPTHR10516. PTHR10516. 1 hit.
PfamiPF00254. FKBP_C. 1 hit.
PF01346. FKBP_N. 1 hit.
[Graphical view]
PROSITEiPS50059. FKBP_PPIASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000Imported.
  2. "Crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000) at 1.6 resolution."
    Zhang H.M., Li M., Gao Y., Chang W.
    Submitted (AUG-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) OF 26-224.

Entry informationi

Entry nameiQ88B84_PSESM
AccessioniPrimary (citable) accession number: Q88B84
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: July 22, 2015
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.