Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q88AS0

- GCST_PSESM

UniProt

Q88AS0 - GCST_PSESM

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Aminomethyltransferase

Gene

gcvT

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

The glycine cleavage system catalyzes the degradation of glycine.UniRule annotation

Catalytic activityi

[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3.UniRule annotation

GO - Molecular functioni

  1. aminomethyltransferase activity Source: UniProtKB-EC
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. glycine catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminotransferase, Transferase

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-312-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AminomethyltransferaseUniRule annotation (EC:2.1.2.10UniRule annotation)
Alternative name(s):
Glycine cleavage system T proteinUniRule annotation
Gene namesi
Name:gcvTUniRule annotation
Synonyms:gcvT-1
Ordered Locus Names:PSPTO_0316
OrganismiPseudomonas syringae pv. tomato (strain DC3000)
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002515: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 360360AminomethyltransferasePRO_0000122588Add
BLAST

Interactioni

Subunit structurei

The glycine cleavage system is composed of four proteins: P, T, L and H.UniRule annotation

Protein-protein interaction databases

STRINGi223283.PSPTO_0316.

Structurei

3D structure databases

ProteinModelPortaliQ88AS0.
SMRiQ88AS0. Positions 4-359.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GcvT family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0404.
HOGENOMiHOG000239381.
KOiK00605.
OMAiIAYLHAD.
OrthoDBiEOG6T1WS5.
PhylomeDBiQ88AS0.

Family and domain databases

Gene3Di2.40.30.110. 1 hit.
3.30.1360.120. 1 hit.
HAMAPiMF_00259. GcvT.
InterProiIPR006223. GCS_T.
IPR022903. GCS_T_bac.
IPR028896. GCST/DmdA.
IPR013977. GCV_T_C.
IPR006222. GCV_T_N.
IPR029043. GcvT/YgfZ_C.
IPR027266. TrmE/GcvT_dom1.
[Graphical view]
PANTHERiPTHR13847:SF5. PTHR13847:SF5. 1 hit.
PfamiPF01571. GCV_T. 1 hit.
PF08669. GCV_T_C. 1 hit.
[Graphical view]
PIRSFiPIRSF006487. GcvT. 1 hit.
SUPFAMiSSF101790. SSF101790. 1 hit.
TIGRFAMsiTIGR00528. gcvT. 1 hit.

Sequencei

Sequence statusi: Complete.

Q88AS0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGQRTPLFDL HLALGAKMVD FGGWDMPLHY GSQVEEHHQV RRDCGVFDVS
60 70 80 90 100
HMNVIDVLGR EAKAWLRRLL ANDVDKLKTP GRALYSAMLD EQAGVIDDMI
110 120 130 140 150
VYLTADGYRL VVNAATGAKD LAWMQSQLGD FDVQLLARSE MAMLAIQGPQ
160 170 180 190 200
ARNRIAQLVS SARAELIRQL KPFEGLDDGD WFIARTGYTG EDGLEIMLPA
210 220 230 240 250
DEAQRFFNEL VGAGISPIGL GARDTLRLEA GMNLYGQDIG EHVSPLASNM
260 270 280 290 300
AWSIAWEPAE RDFIGRQALE SERAEGTAFK LVGLVLEERG VLRAHQVVRV
310 320 330 340 350
AEIGEGEITS GSFSPTLSKS IALARVPMAT ADRAEVEIRG KWYPVRVVQP
360
AFVRHGKTLI
Length:360
Mass (Da):39,665
Last modified:May 30, 2003 - v1
Checksum:iB3794951DC3A1E0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO53861.1.
RefSeqiNP_790166.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO53861; AAO53861; PSPTO_0316.
GeneIDi1181925.
KEGGipst:PSPTO_0316.
PATRICi19991802. VBIPseSyr93040_0329.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO53861.1 .
RefSeqi NP_790166.1. NC_004578.1.

3D structure databases

ProteinModelPortali Q88AS0.
SMRi Q88AS0. Positions 4-359.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 223283.PSPTO_0316.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO53861 ; AAO53861 ; PSPTO_0316 .
GeneIDi 1181925.
KEGGi pst:PSPTO_0316.
PATRICi 19991802. VBIPseSyr93040_0329.

Phylogenomic databases

eggNOGi COG0404.
HOGENOMi HOG000239381.
KOi K00605.
OMAi IAYLHAD.
OrthoDBi EOG6T1WS5.
PhylomeDBi Q88AS0.

Enzyme and pathway databases

BioCyci PSYR223283:GJIX-312-MONOMER.

Family and domain databases

Gene3Di 2.40.30.110. 1 hit.
3.30.1360.120. 1 hit.
HAMAPi MF_00259. GcvT.
InterProi IPR006223. GCS_T.
IPR022903. GCS_T_bac.
IPR028896. GCST/DmdA.
IPR013977. GCV_T_C.
IPR006222. GCV_T_N.
IPR029043. GcvT/YgfZ_C.
IPR027266. TrmE/GcvT_dom1.
[Graphical view ]
PANTHERi PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfami PF01571. GCV_T. 1 hit.
PF08669. GCV_T_C. 1 hit.
[Graphical view ]
PIRSFi PIRSF006487. GcvT. 1 hit.
SUPFAMi SSF101790. SSF101790. 1 hit.
TIGRFAMsi TIGR00528. gcvT. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000.

Entry informationi

Entry nameiGCST_PSESM
AccessioniPrimary (citable) accession number: Q88AS0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2003
Last sequence update: May 30, 2003
Last modified: October 1, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3