Q88899 (P32_TRVPP) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: 32 kDa protein
Organism	Tobacco rattle virus (isolate PpK20) (TRV) [Reference proteome]
Taxonomic identifier	652939 [NCBI]
Taxonomic lineage	Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Virgaviridae › Tobravirus › Tobacco rattle virus
Virus host	Bidens pilosa (Hairy beggarticks) (Cobbler's pegs) [TaxID: 42337] Capsicum annuum (Bell pepper) [TaxID: 4072] Cynara scolymus (Artichoke) (Cynara cardunculus var. scolymus) [TaxID: 59895] Solanum lycopersicum (Tomato) (Lycopersicon esculentum) [TaxID: 4081]

Protein attributes

Sequence length	292 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Function	May be involved in transmission by vector nematode species. Ref.3
Sequence caution	The sequence CAA85423.2 differs from that shown. Reason: Erroneous termination at positions 291 and 292. Translated as Trp, Arg.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 292	292	32 kDa protein		PRO_0000409294

Sequences

	Sequence		Length	Mass (Da)
	Q88899 [UniParc]. Last modified May 31, 2011. Version 3. Checksum: 87DEB38421C7DC6C	FASTA	292	32,840
	10 20 30 40 50 60 MVIVTKGAYV HEFPRTAEWN AFAQILSREH GYIVSDTALE GAAKPYYVVN SSGFYGPPGL 70 80 90 100 110 120 DGLISTLDRE LQYYSKLLYE IKGLGVMSDE NVFGTQYDGN LTARVSRLER RLNPMSNIGS 130 140 150 160 170 180 SSRPWSEHKS AVKKADLERY VYANFADWSN HLGPAGKSTR EVVKYLMYRM GYYSDTSGIG 190 200 210 220 230 240 HDLNYKHFRD HLDIYNLTCS PPFLVSSAVV DGHYARDKFV SFQGVCGFNP MFPDVNGLKS 250 260 270 280 290 SWSLGRQLDD IRSQKKEVSG TNQEPNYYYD GDTLKPIGSG ASVVGERRPG WR

References

[1]	"Sequence of RNA 2 of a nematode-transmissible isolate of tobacco rattle virus." Hernandez C., Mathis A., Brown D.J., Bol J.F. J. Gen. Virol. 76:2847-2851(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]	Hernandez C. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION.
[3]	"Nonstructural proteins of Tobacco rattle virus which have a role in nematode-transmission: expression pattern and interaction with viral coat protein." Visser P.B., Bol J.F. J. Gen. Virol. 80:3273-3280(1999) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z36974 Genomic RNA. Translation: CAA85423.2. Different termination.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

P32_TRVPP

Accession

Primary (citable) accession number: Q88899

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 28 of the entry and version 3 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program