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Q887F8

- Q887F8_PSESM

UniProt

Q887F8 - Q887F8_PSESM

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 91 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: JCVI

    GO - Biological processi

    1. removal of superoxide radicals Source: JCVI
    2. superoxide metabolic process Source: JCVI

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciPSYR223283:GJIX-1363-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    Ordered Locus Names:PSPTO_1338Imported
    OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
    Taxonomic identifieri223283 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000002515: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi223283.PSPTO_1338.

    Structurei

    3D structure databases

    ProteinModelPortaliQ887F8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2032.
    HOGENOMiHOG000263449.
    KOiK04565.
    OMAiMAAGGHW.
    OrthoDBiEOG6K13RS.
    PhylomeDBiQ887F8.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q887F8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKPHLLLGLL GAFSLSVQAA SLDVPINLVS ADGAPKLIGS VTVSETEYGL    50
    LFTPKLNGLP AGIHGFHVHE NGSCEAGTKD GVKVAALAAG GHFDPAKTGK 100
    HLGPYARGHL GDLPALYVTA DGTADYPVLA PRLKKLSEIK GHALMVHAGG 150
    DNHADMPKPL GGGGDRAACG VI 172
    Length:172
    Mass (Da):17,465
    Last modified:June 1, 2003 - v1
    Checksum:iC829BC408590A472
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016853 Genomic DNA. Translation: AAO54860.1.
    RefSeqiNP_791165.1. NC_004578.1.

    Genome annotation databases

    EnsemblBacteriaiAAO54860; AAO54860; PSPTO_1338.
    GeneIDi1182974.
    KEGGipst:PSPTO_1338.
    PATRICi19993918. VBIPseSyr93040_1360.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016853 Genomic DNA. Translation: AAO54860.1 .
    RefSeqi NP_791165.1. NC_004578.1.

    3D structure databases

    ProteinModelPortali Q887F8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 223283.PSPTO_1338.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO54860 ; AAO54860 ; PSPTO_1338 .
    GeneIDi 1182974.
    KEGGi pst:PSPTO_1338.
    PATRICi 19993918. VBIPseSyr93040_1360.

    Phylogenomic databases

    eggNOGi COG2032.
    HOGENOMi HOG000263449.
    KOi K04565.
    OMAi MAAGGHW.
    OrthoDBi EOG6K13RS.
    PhylomeDBi Q887F8.

    Enzyme and pathway databases

    BioCyci PSYR223283:GJIX-1363-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DC3000Imported.

    Entry informationi

    Entry nameiQ887F8_PSESM
    AccessioniPrimary (citable) accession number: Q887F8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 91 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3