Q887F0 (Q887F0_PSESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sensory box/GGDEF domain protein EMBL AAO54868.1

Gene names

Ordered Locus Names:

PSPTO_1346 EMBL AAO54868.1

Organism

Pseudomonas syringae pv. tomato (strain DC3000) [Complete proteome] [HAMAP]

Taxonomic identifier

223283 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	425 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q887F0 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: AF7E677D8189DC5F	FASTA	425	46,914
	10 20 30 40 50 60 MTSSSQRLAL LEAVVEQSFN AVLITDANLA NGGPLIVYVN PAFCTMTGYT AEELIGLSPR 70 80 90 100 110 120 ILQGADTDPQ VIERLRQCLS ERLFFEGSTV NYRADGSPYV VEWKITPVRD DAGQVCNFVS 130 140 150 160 170 180 VQQNISPRIR AEREQHLLAQ ALNAAFDPII ITDRNSTIVF ANEAFQLITG YSAPEIIGQN 190 200 210 220 230 240 PRMLRSGKHD ALFYAQFNES LASGEPFRTT FINKRKDGSL FYAEHSISPL RNVEGAMTHY 250 260 270 280 290 300 VSISQDVTTR LGREQKLLEI AHSDTLTGLD NRRAAEHTLE RLINTARMAG KPFSFIICDI 310 320 330 340 350 360 DHFKSVNDRY GHPAGDSVLK SVAAILKHRI RAFDVAARWG GEEFLILVPD SSLKQAAELA 370 380 390 400 410 420 ERVRKGVESL EIPEAGPVTI SLGVAELSPG ETAASLIQRA DKVLYQAKRL GRNRVEIAQA DDPAY

References

[1]

"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. , Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed: 12928499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016853 Genomic DNA. Translation: AAO54868.1.
RefSeq	NP_791173.1. NC_004578.1.
3D structure databases
HSSP	HSSP built from PDB template 1N9L based on UniProtKB Q8LPE0.
ProteinModelPortal	Q887F0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1182982.
GenomeReviews	Gene locus PSPTO1346 in contig AE016853_GR.
KEGG	pst:PSPTO_1346.
NMPDR	fig|223283.1.peg.1311.
PATRIC	19993934. VBIPseSyr93040_1368.
TIGR	PSPTO1346.
Phylogenomic databases
HOGENOM	HBG335428.
OMA	VFANEAF.
ProtClustDB	CLSK582163.
Enzyme and pathway databases
BioCyc	PSYR223283:PSPTO_1346-MONOMER.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR013767. PAS_fold. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF00989. PAS. 2 hits. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00086. PAC. 2 hits. SM00091. PAS. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 2 hits.
PROSITE	PS50887. GGDEF. 1 hit. PS50113. PAC. 2 hits. PS50112. PAS. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q887F0_PSESM

Accession

Primary (citable) accession number: Q887F0

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)