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Protein
Submitted name:

Outer-membrane type III secretion protein HrcC

Gene

hrcC

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-1414-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Outer-membrane type III secretion protein HrcCImported
Gene namesi
Name:hrcCImported
Ordered Locus Names:PSPTO_1389Imported
OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002515 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_1389.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini175 – 318144Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000270092.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.
PhylomeDBiQ887C1.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q887C1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKALMWLPL LLIGVIPATW AVTPEAWKHT AYAYDARQTE LSTALADFAR
60 70 80 90 100
EFGMSLDMSP VQGKLDGRIR AQNPEEFLER LSQEYHFQWF VYNDTLYVSP
110 120 130 140 150
SSEHTSARIE VSPDAVDDLQ TALTDVGLLD KRFGWGSLPD EGVVLVRGPA
160 170 180 190 200
KYVEFVRDYS KKVEKPDEKA DKQDVVVLPL KYANAADRTI RYRDQQLVVA
210 220 230 240 250
GVASILQELL ESRSRGESID SVNLLPGQGS SVANSTGVAA AGLPYNLGSN
260 270 280 290 300
GIDTGALQQG IDRVLNFNSK KTAKGHASGK ANIRVSADVR NNSVLIYDLP
310 320 330 340 350
ERKAMYQKLV KELDVPRNLI EIDAVILDID RNELAELSSR WNFNAGSVGG
360 370 380 390 400
GANLFDAGTS STLFLQNASK FSAELHALEG NGSASVIGNP SILTLENQPA
410 420 430 440 450
VIDLSRTEYL TATSERAADI LPITAGTSLQ VIPRSLDNDG KPQVQMIVDI
460 470 480 490 500
EDGQIDVSTI NDTQPSVRRG NVSTQAVIAE HGSLVIGGFH GLEANDRIHK
510 520 530 540 550
IPLLGDIPYI GKLLFQSRSR ELSQRERLFI LTPRLIGDQV NPARYVQNGN
560 570 580 590 600
PHDVDDQMKK IKERRDGGEL PTRGDIQKVF TQMIDGAAPE GLRAGQTLPF
610 620 630 640 650
ETDSLCDPGE GLTLDGQRSQ WFVKKDWGVA VVVARNNTDK PVRIDESRCG
660 670 680 690
GRWVIGVAAW PHAWLQPGEE SEVYIAVRQP QISKMAKESR PSLLRGAKP
Length:699
Mass (Da):76,732
Last modified:January 23, 2007 - v2
Checksum:i5FEB196EEF41325F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO54911.2.
RefSeqiNP_791216.2. NC_004578.1.
WP_007244827.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO54911; AAO54911; PSPTO_1389.
GeneIDi1183025.
KEGGipst:PSPTO_1389.
PATRICi19994020. VBIPseSyr93040_1411.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO54911.2.
RefSeqiNP_791216.2. NC_004578.1.
WP_007244827.1. NC_004578.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223283.PSPTO_1389.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO54911; AAO54911; PSPTO_1389.
GeneIDi1183025.
KEGGipst:PSPTO_1389.
PATRICi19994020. VBIPseSyr93040_1411.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000270092.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.
PhylomeDBiQ887C1.

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-1414-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ887C1_PSESM
AccessioniPrimary (citable) accession number: Q887C1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.