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Protein

Aminotransferase

Gene

aspC

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  • L-aspartate:2-oxoglutarate aminotransferase activity Source: JCVI
  • pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  • aspartate biosynthetic process Source: JCVI
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-2204-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Name:aspCImported
Ordered Locus Names:PSPTO_2163Imported
OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002515 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_2163.

Structurei

3D structure databases

ProteinModelPortaliQ884D0.
SMRiQ884D0. Positions 3-398.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 394366Aminotran_1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiNYPYYDA.
OrthoDBiPOG091H00HU.
PhylomeDBiQ884D0.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q884D0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLFSAVEMA PRDPILGINE AFNADTRTTK VNLGVGVYCD EDGRIPLLRA
60 70 80 90 100
VAEAEKIRVA QHAPRGYLPI DGIAAYDQAV QKLLLGADSP LIASGRVLTT
110 120 130 140 150
QSVGGTGALK IGADFLKQLL PNAVVAISDP SWENHRALFE TAGFPVQNYR
160 170 180 190 200
YYDAATHDVN RAGMLEDLHN LPNNSVVVLH ACCHNPTGVD LSLDDWKKVL
210 220 230 240 250
EVVKAKGHVP FLDMAYQGFG QGIQEDALAV RLFAESGLTF FASSSFSKSL
260 270 280 290 300
SLYGERVGAL SIITESKEET ARVLSQVKRV IRTNYSNPPT HGAIISAAVL
310 320 330 340 350
NDPALRAMWE EELGEMRVRI QGMRKAMVER LADNPAGQDF SFVGRQCGMF
360 370 380 390
SYSGLTAAQA QRLRSEFGIY ALDTGRICVA ALNQKNIDAV CEAIKKVL
Length:398
Mass (Da):43,227
Last modified:June 1, 2003 - v1
Checksum:iFAC88FFB11D9DC29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO55680.1.
RefSeqiNP_791985.1. NC_004578.1.
WP_011103882.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO55680; AAO55680; PSPTO_2163.
GeneIDi1183810.
KEGGipst:PSPTO_2163.
PATRICi19995604. VBIPseSyr93040_2194.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO55680.1.
RefSeqiNP_791985.1. NC_004578.1.
WP_011103882.1. NC_004578.1.

3D structure databases

ProteinModelPortaliQ884D0.
SMRiQ884D0. Positions 3-398.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223283.PSPTO_2163.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO55680; AAO55680; PSPTO_2163.
GeneIDi1183810.
KEGGipst:PSPTO_2163.
PATRICi19995604. VBIPseSyr93040_2194.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiNYPYYDA.
OrthoDBiPOG091H00HU.
PhylomeDBiQ884D0.

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-2204-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ884D0_PSESM
AccessioniPrimary (citable) accession number: Q884D0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 7, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.