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Q881X0

- GLGB_PSESM

UniProt

Q881X0 - GLGB_PSESM

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei420 – 4201NucleophileUniRule annotation
Active sitei473 – 4731Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-2809-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:PSPTO_2762
OrganismiPseudomonas syringae pv. tomato (strain DC3000)
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002515: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7417411,4-alpha-glucan branching enzyme GlgBPRO_0000188732Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi223283.PSPTO_2762.

Structurei

3D structure databases

ProteinModelPortaliQ881X0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiRSISKRI.
OrthoDBiEOG6JX7GT.
PhylomeDBiQ881X0.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q881X0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNAPDKTGTD RRAVPAAVDL DALIRAEHRD PFSILGPHDD GKGGQYVRAY
60 70 80 90 100
LPAALSVRLL ARDDGRELAE LHMSDVPGFF VGHLEQPQPY LLKINWAGGE
110 120 130 140 150
QITEDPYSYG PLLGEMDLYL FAEGNHRDLS SCLGAQVTSV DGVEGVRFAV
160 170 180 190 200
WAPNARRVSV VGSFNGWDGR RHPMRLRHPT GVWEIFVPRL QPGEVYKYEI
210 220 230 240 250
LGAHGILPLK SDPMALATTL PPDTASKISA PLKFEWHDQD WLQSRAGRHD
260 270 280 290 300
VAAPLSIYEL HAGSWQMEQN DEGQWRQYNW RELADRLIPY VKELGFTHIE
310 320 330 340 350
LMPIMEHPFG GSWGYQLLAQ FAPTARYGSP EDFAAFVDAC HQAEIGVILD
360 370 380 390 400
WVPAHFPTDT HGLAQFDGTA LYEYADPKEG FHQDWDTLIY NLGRTEVHGF
410 420 430 440 450
MLASALHWLK HYHIDGLRVD AVASMLYRDY SRKAGEWVPN RFGGRENLEA
460 470 480 490 500
IDFLRHLNDV VALEAPGTMV IAEESTAWPG VSESTQKGGL GFNYKWNMGW
510 520 530 540 550
MHDSLQYMEE DPINREHHHG KLSFSLVYAW SERFVLPISH DEVVHGKHSL
560 570 580 590 600
IDKMPGDRWQ KFANLRAYLA FMWTHPGKKL LFMGCEFGQW REWNHDEQLD
610 620 630 640 650
WYLMQYAEHV GVKKLVGDLN RIYREEKALH QRDADPTGFQ WLIGDDKSNS
660 670 680 690 700
VFAYLRWSND GEPLLVVANM TPVPREGYRV GVPLQGAWTE LLNSDAETYA
710 720 730 740
GSNIGNGGEV ISEDEPVHGM SASLTLNLPP LAVLIFKPKK G
Length:741
Mass (Da):83,823
Last modified:June 1, 2003 - v1
Checksum:i2D494D852D85E95D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO56262.1.
RefSeqiNP_792567.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO56262; AAO56262; PSPTO_2762.
GeneIDi1184416.
KEGGipst:PSPTO_2762.
PATRICi19996873. VBIPseSyr93040_2820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO56262.1 .
RefSeqi NP_792567.1. NC_004578.1.

3D structure databases

ProteinModelPortali Q881X0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 223283.PSPTO_2762.

Protocols and materials databases

DNASUi 1184416.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO56262 ; AAO56262 ; PSPTO_2762 .
GeneIDi 1184416.
KEGGi pst:PSPTO_2762.
PATRICi 19996873. VBIPseSyr93040_2820.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi RSISKRI.
OrthoDBi EOG6JX7GT.
PhylomeDBi Q881X0.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci PSYR223283:GJIX-2809-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000.

Entry informationi

Entry nameiGLGB_PSESM
AccessioniPrimary (citable) accession number: Q881X0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: June 1, 2003
Last modified: October 1, 2014
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3