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Protein

Glycogen synthase

Gene

glgA

Organism
Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei21ADP-glucoseUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:PSPTO_3125
OrganismiPseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002515 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001886341 – 484Glycogen synthaseAdd BLAST484

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_3125.

Structurei

3D structure databases

ProteinModelPortaliQ880M9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CXW. Bacteria.
COG0297. LUCA.
HOGENOMiHOG000294941.
KOiK00703.
OMAiLLNAMRC.
OrthoDBiPOG091H08HW.
PhylomeDBiQ880M9.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q880M9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQVNRRKVL FVTSELADLV KTGGLGDVSA ALPRAMRHLH DVRVLIPGYP
60 70 80 90 100
QVINSGNPIH IISQLGGHAA LPPCKVGRMD MKDGLVIYVL ICPELYEREG
110 120 130 140 150
TPYADTNGRD WSDNHIRFAR LGLAAAEFAA GEVKSQWCPE LVHAHDWPAG
160 170 180 190 200
LAPAYMRWRG QSTPSIFTVH NLAYQGTVST ASSRELGIPD EAITPEGMEF
210 220 230 240 250
YGKLSFIKAG MAFANHITTV SATYAREITT PEFGCGLEGF LQSKADKGQL
260 270 280 290 300
SGIPNGIDES WDAATDEHLI CHFAPNEWTR KEINADYVRE LFELDASSGP
310 320 330 340 350
LYAVVSRLVY QKGLDLTIGV AEHIVNNGGQ IAIIGRGEPE EEDAMRELAA
360 370 380 390 400
RFPGRIGVRI GFNETDARRM FAGSDFLLMP SRYEPCGLSQ MYAQRFGSLP
410 420 430 440 450
VARNTGGLAD TIEDGVTGFL FNESTVESYT EALNRTFQVF AHPELLNAMR
460 470 480
CRAMAAPFNW HQAVEPYAEL YRDLLKKNVS MTSN
Length:484
Mass (Da):53,319
Last modified:June 1, 2003 - v1
Checksum:iECFB524F0667B595
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO56612.1.
RefSeqiNP_792917.1. NC_004578.1.
WP_011104395.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO56612; AAO56612; PSPTO_3125.
GeneIDi1184782.
KEGGipst:PSPTO_3125.
PATRICi19997623. VBIPseSyr93040_3191.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO56612.1.
RefSeqiNP_792917.1. NC_004578.1.
WP_011104395.1. NC_004578.1.

3D structure databases

ProteinModelPortaliQ880M9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223283.PSPTO_3125.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO56612; AAO56612; PSPTO_3125.
GeneIDi1184782.
KEGGipst:PSPTO_3125.
PATRICi19997623. VBIPseSyr93040_3191.

Phylogenomic databases

eggNOGiENOG4105CXW. Bacteria.
COG0297. LUCA.
HOGENOMiHOG000294941.
KOiK00703.
OMAiLLNAMRC.
OrthoDBiPOG091H08HW.
PhylomeDBiQ880M9.

Enzyme and pathway databases

UniPathwayiUPA00164.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth. 1 hit.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLGA_PSESM
AccessioniPrimary (citable) accession number: Q880M9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.