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Protein

Protein Tat

Gene

tat

Organism
Simian immunodeficiency virus (isolate mac239) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ActivatorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

RNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TatUniRule annotation
Gene namesi
Name:tatImported
OrganismiSimian immunodeficiency virus (isolate mac239) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)Imported
Taxonomic identifieri1173522 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiMacaca (macaques) [TaxID: 9539]
Proteomesi
  • UP000005623 Componenti: Genome

Subcellular locationi

  • Host nucleushost nucleolus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ88013.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lentiviruses Tat family.UniRule annotation

Family and domain databases

Gene3Di4.10.20.10. 1 hit.
InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
PRINTSiPR00055. HIVTATDOMAIN.

Sequencei

Sequence statusi: Complete.

Q88013-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METPLREQEN SLESSNERSS CISEADASTP ESANLGEEIL SQLYRPLEAC
60 70 80 90 100
YNTCYCKKCC YHCQFCFLKK GLGICYEQSR KRRRTPKKAK ANTSSASNKP
110 120 130
ISNRTRHCQP EKAKKETVEK AVATAPGLGR
Length:130
Mass (Da):14,600
Last modified:November 1, 1996 - v1
Checksum:iE7870F9EEE2FABD8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33262 Genomic RNA. Translation: AAA47630.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33262 Genomic RNA. Translation: AAA47630.1.

3D structure databases

ProteinModelPortaliQ88013.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.20.10. 1 hit.
InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
PRINTSiPR00055. HIVTATDOMAIN.
ProtoNetiSearch...

Publicationsi

  1. "Induction of AIDS in rhesus monkeys by molecularly cloned simian immunodeficiency virus."
    Kestler H., Kodama T., Ringler D., Marthas M., Pedersen N., Lackner A., Regier D., Sehgal P., Daniel M., King N.
    Science 248:1109-1112(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate mac239Imported.

Entry informationi

Entry nameiQ88013_SIVM3
AccessioniPrimary (citable) accession number: Q88013
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 14, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.