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Q87ZG5

- Q87ZG5_PSESM

UniProt

Q87ZG5 - Q87ZG5_PSESM

Protein
Submitted name:

DNA ligase, ATP-dependent, putative

Gene

PSPTO_3464

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 77 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSYR223283:GJIX-3521-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, ATP-dependent, putativeImported
    Gene namesi
    Ordered Locus Names:PSPTO_3464Imported
    OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
    Taxonomic identifieri223283 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000002515: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi223283.PSPTO_3464.

    Structurei

    3D structure databases

    ProteinModelPortaliQ87ZG5.
    SMRiQ87ZG5. Positions 555-846.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiNGLPDFQ.
    OrthoDBiEOG661H49.
    PhylomeDBiQ87ZG5.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q87ZG5-1 [UniParc]FASTAAdd to Basket

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    MVKPASEYTR KRNFDVTSEP LESKRKGKAR SGALSFVIQK HDARNLHYDF    50
    RLELDGTLKS WAVPKGPSLD PKQKRLAVHV EDHPLDYAAF EGSIPKGQYG 100
    GGDVIVWDRG IWQPHGDPRK TYEDGKLKFT LIGEKLSGEW ALVRTRLKGS 150
    GSKEQWLLIK EKDDIARPAA EYDITEAQPQ SVISGAHVGA GRSAPAKPKA 200
    KAVEAKPARK PAPKKAKAVF PDTFAPQLAT LVDAPPAGDW LYEIKFDGYR 250
    MLTRIQNDEV RLFTRNGNDW TDQLPELTKA LKGLKLQDSW FDGEVVVLDE 300
    QGLPDFQGLQ NAFDEGHSKN IFYYLFDMPF LSGEDLREVP LEQRRDALKQ 350
    VLGSQRSRLL RYSDAFQAGH QDIVASAAAM GLEGVIGKRA GSAYVGKRNA 400
    DWIKLKCRLR QEFVIVGYTA PQGSRSAFGA LLLAVNDDAQ GLVYAGRVGT 450
    GFTEATLKHV HKQLKPLHRE ESPLAKKLTS AQARGVQWVE PTLVCEAEFA 500
    QWTREGIVRQ AAFFGLRGDK PAGDVVREDA QPAEAASVTP EPSRQPGKKT 550
    ARGKVDVAGT GISHPQRVID STTGTKKIEL AQFYESIADW ILPYLNKRPV 600
    ALLRCPEGID GEQFFQKHAE HLAIPHIRQL DRALDPGHAA LMEIDSVQAL 650
    VGAAQMGAIE LHTWGATRDR IETPDHFVLD LDPDPALPWR SMIEATQMVL 700
    AVLEELGLEA FLKTSGGKGM HIIVPLARQA EWDTVKAFAK AIAEFISRQL 750
    PERFTATMGP KNRVGKIFID YLRNSRGGST VTAYSVRARP GLPVSVPIAL 800
    HELTGLTSSA QWDITNLEQR LSQLKSDPWA GYSNRRKITQ KMWKQLGAKQ 850
    P 851
    Length:851
    Mass (Da):94,338
    Last modified:June 1, 2003 - v1
    Checksum:iBFDDFED84CD4153C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016853 Genomic DNA. Translation: AAO56939.1.
    RefSeqiNP_793244.1. NC_004578.1.

    Genome annotation databases

    EnsemblBacteriaiAAO56939; AAO56939; PSPTO_3464.
    GeneIDi1185129.
    KEGGipst:PSPTO_3464.
    PATRICi19998347. VBIPseSyr93040_3545.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE016853 Genomic DNA. Translation: AAO56939.1 .
    RefSeqi NP_793244.1. NC_004578.1.

    3D structure databases

    ProteinModelPortali Q87ZG5.
    SMRi Q87ZG5. Positions 555-846.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 223283.PSPTO_3464.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO56939 ; AAO56939 ; PSPTO_3464 .
    GeneIDi 1185129.
    KEGGi pst:PSPTO_3464.
    PATRICi 19998347. VBIPseSyr93040_3545.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi NGLPDFQ.
    OrthoDBi EOG661H49.
    PhylomeDBi Q87ZG5.

    Enzyme and pathway databases

    BioCyci PSYR223283:GJIX-3521-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DC3000Imported.

    Entry informationi

    Entry nameiQ87ZG5_PSESM
    AccessioniPrimary (citable) accession number: Q87ZG5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3