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Q87ZG5

- Q87ZG5_PSESM

UniProt

Q87ZG5 - Q87ZG5_PSESM

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Protein
Submitted name: DNA ligase, ATP-dependent, putative
Gene
PSPTO_3464
Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-3521-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, ATP-dependent, putativeImported
Gene namesi
Ordered Locus Names:PSPTO_3464Imported
OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002515: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_3464.

Structurei

3D structure databases

ProteinModelPortaliQ87ZG5.
SMRiQ87ZG5. Positions 555-846.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiNGLPDFQ.
OrthoDBiEOG661H49.
PhylomeDBiQ87ZG5.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87ZG5-1 [UniParc]FASTAAdd to Basket

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MVKPASEYTR KRNFDVTSEP LESKRKGKAR SGALSFVIQK HDARNLHYDF    50
RLELDGTLKS WAVPKGPSLD PKQKRLAVHV EDHPLDYAAF EGSIPKGQYG 100
GGDVIVWDRG IWQPHGDPRK TYEDGKLKFT LIGEKLSGEW ALVRTRLKGS 150
GSKEQWLLIK EKDDIARPAA EYDITEAQPQ SVISGAHVGA GRSAPAKPKA 200
KAVEAKPARK PAPKKAKAVF PDTFAPQLAT LVDAPPAGDW LYEIKFDGYR 250
MLTRIQNDEV RLFTRNGNDW TDQLPELTKA LKGLKLQDSW FDGEVVVLDE 300
QGLPDFQGLQ NAFDEGHSKN IFYYLFDMPF LSGEDLREVP LEQRRDALKQ 350
VLGSQRSRLL RYSDAFQAGH QDIVASAAAM GLEGVIGKRA GSAYVGKRNA 400
DWIKLKCRLR QEFVIVGYTA PQGSRSAFGA LLLAVNDDAQ GLVYAGRVGT 450
GFTEATLKHV HKQLKPLHRE ESPLAKKLTS AQARGVQWVE PTLVCEAEFA 500
QWTREGIVRQ AAFFGLRGDK PAGDVVREDA QPAEAASVTP EPSRQPGKKT 550
ARGKVDVAGT GISHPQRVID STTGTKKIEL AQFYESIADW ILPYLNKRPV 600
ALLRCPEGID GEQFFQKHAE HLAIPHIRQL DRALDPGHAA LMEIDSVQAL 650
VGAAQMGAIE LHTWGATRDR IETPDHFVLD LDPDPALPWR SMIEATQMVL 700
AVLEELGLEA FLKTSGGKGM HIIVPLARQA EWDTVKAFAK AIAEFISRQL 750
PERFTATMGP KNRVGKIFID YLRNSRGGST VTAYSVRARP GLPVSVPIAL 800
HELTGLTSSA QWDITNLEQR LSQLKSDPWA GYSNRRKITQ KMWKQLGAKQ 850
P 851
Length:851
Mass (Da):94,338
Last modified:June 1, 2003 - v1
Checksum:iBFDDFED84CD4153C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016853 Genomic DNA. Translation: AAO56939.1.
RefSeqiNP_793244.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO56939; AAO56939; PSPTO_3464.
GeneIDi1185129.
KEGGipst:PSPTO_3464.
PATRICi19998347. VBIPseSyr93040_3545.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016853 Genomic DNA. Translation: AAO56939.1 .
RefSeqi NP_793244.1. NC_004578.1.

3D structure databases

ProteinModelPortali Q87ZG5.
SMRi Q87ZG5. Positions 555-846.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 223283.PSPTO_3464.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO56939 ; AAO56939 ; PSPTO_3464 .
GeneIDi 1185129.
KEGGi pst:PSPTO_3464.
PATRICi 19998347. VBIPseSyr93040_3545.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi NGLPDFQ.
OrthoDBi EOG661H49.
PhylomeDBi Q87ZG5.

Enzyme and pathway databases

BioCyci PSYR223283:GJIX-3521-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000Imported.

Entry informationi

Entry nameiQ87ZG5_PSESM
AccessioniPrimary (citable) accession number: Q87ZG5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: June 11, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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