Q87Z26 (Q87Z26_PSESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lyase, putative EMBL AAO57079.1

Gene names

Ordered Locus Names:

PSPTO_3605 EMBL AAO57079.1

Organism

Pseudomonas syringae pv. tomato (strain DC3000) [Complete proteome] [HAMAP] EMBL AAO57079.1

Taxonomic identifier

223283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae group › Pseudomonas syringae group genomosp. 3 › Pseudomonas syringae pv. tomato

Protein attributes

Sequence length	222 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL AAO57079.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87Z26 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 7CAF117DAEFF0E8A	FASTA	222	24,781
	10 20 30 40 50 60 MIDLATWNLS VPVGDPATII ETPKLLKGYR DGYFQSGDTL FFWAPVTGST TENAKYPRSE 70 80 90 100 110 120 LRETTSDGRV FNWAYSSADN FLRATLEVDQ VPSTGKIVIG QIHCYQSTEP LLKVEYQYKE 130 140 150 160 170 180 KLKTGNIVAK FRRTPDSEIE VITIAQGVPL DQQFSYTINL SPSGDLTVSA FDAVWYAKLD 190 200 210 220 SAWSSKLFYF KAGVYTQDNT GYTTEGGSAT FYKLAIAHDK KS

References

[1]

"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. , Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000 EMBL AAO57079.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016853 Genomic DNA. Translation: AAO57079.1.
RefSeq	NP_793384.1. NC_004578.1.
3D structure databases
ProteinModelPortal	Q87Z26.
ModBase	Search...
Protein-protein interaction databases
STRING	223283.PSPTO_3605.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAO57079; AAO57079; PSPTO_3605.
GeneID	1185270.
KEGG	pst:PSPTO_3605.
PATRIC	19998646. VBIPseSyr93040_3694.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG311268.
HOGENOM	HOG000217677.
OMA	WAYSSAD.
ProtClustDB	CLSK866376.
Enzyme and pathway databases
BioCyc	PSYR223283:GJIX-3662-MONOMER.
Family and domain databases
Gene3D	2.60.120.200. 1 hit.
InterPro	IPR014895. Alginate_lyase_2. IPR008985. ConA-like_lec_gl_sf. IPR013320. ConA-like_subgrp. [Graphical view]
Pfam	PF08787. Alginate_lyase2. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q87Z26_PSESM

Accession

Primary (citable) accession number: Q87Z26

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)