Q87Z00 (RECR_PSESM) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Recombination protein RecR

Gene names

Name:	recR
Ordered Locus Names:	PSPTO_3638

Organism

Pseudomonas syringae pv. tomato (strain DC3000) [Complete proteome] [HAMAP]

Taxonomic identifier

223283 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringae group › Pseudomonas syringae group genomosp. 3 › Pseudomonas syringae pv. tomato

Protein attributes

Sequence length	200 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO By similarity. HAMAP-Rule MF_00017
Sequence similarities	Belongs to the RecR family. Contains 1 Toprim domain.

Ontologies

Keywords
Biological process	DNA damage DNA recombination DNA repair
Domain	Zinc-finger
Ligand	Metal-binding Zinc
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: HAMAP DNA repair Inferred from electronic annotation. Source: HAMAP
Molecular_function	DNA binding Inferred from electronic annotation. Source: HAMAP metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 200	200	Recombination protein RecR HAMAP-Rule MF_00017		PRO_0000190368
Regions
	Domain	80 – 175	96	Toprim
	Zinc finger	57 – 72	16	C4-type Potential

Sequences

	Sequence		Length	Mass (Da)
	Q87Z00 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: E94F0397497A4551	FASTA	200	21,555
	10 20 30 40 50 60 MSFSPLIRQL IDAFRVLPGV GQKTAQRMAL QLLERDRSGG SRLALALGQA MDGVGHCRLC 70 80 90 100 110 120 RTLTEEELCP QCSDLRRNDT LLCVVEGPTD VYAVEQTGYR GRYFVLKGHL SPLDGLGPEA 130 140 150 160 170 180 IGIPQLMERI SQQATFTEVI LATNPTVEGE ATAHYIAQLL HDKGLVASRI AHGVPLGGEL 190 200 DLVDGGTLAH SFAGRKPIAL

References

[1]

"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. , Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016853 Genomic DNA. Translation: AAO57109.1.
RefSeq	NP_793414.1. NC_004578.1.
3D structure databases
ProteinModelPortal	Q87Z00.
ModBase	Search...
Protein-protein interaction databases
STRING	223283.PSPTO_3638.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAO57109; AAO57109; PSPTO_3638.
GeneID	1185303.
KEGG	pst:PSPTO_3638.
PATRIC	19998710. VBIPseSyr93040_3726.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0353.
HOGENOM	HOG000103272.
KO	K06187.
OMA	TDPNLEG.
ProtClustDB	PRK00076.
Enzyme and pathway databases
BioCyc	PSYR223283:GJIX-3693-MONOMER.
Family and domain databases
HAMAP	MF_00017. RecR.
InterPro	IPR000093. DNA_Rcmb_RecR. IPR023627. Rcmb_RecR. IPR023628. Rcmb_RecR_C4-type_Zn. IPR015967. Rcmb_RecR_CS. IPR006171. Toprim_domain. [Graphical view]
Pfam	PF02132. RecR. 1 hit. PF13662. Toprim_4. 1 hit. [Graphical view]
SMART	SM00493. TOPRIM. 1 hit. [Graphical view]
SUPFAM	SSF111304. RecR. 1 hit.
TIGRFAMs	TIGR00615. recR. 1 hit.
PROSITE	PS01300. RECR. 1 hit. PS50880. TOPRIM. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RECR_PSESM

Accession

Primary (citable) accession number: Q87Z00

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 24, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program