Q87YX6 (Q87YX6_PSESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase family protein EMBL AAO57135.1

Gene names

Ordered Locus Names:

PSPTO_3666 EMBL AAO57135.1

Organism

Pseudomonas syringae pv. tomato (strain DC3000) [Complete proteome] [HAMAP]

Taxonomic identifier

223283 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	309 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87YX6 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 289E60D654C512FB	FASTA	309	35,692
	10 20 30 40 50 60 MSADYPRDLI GYGSNPPHPR WPGDARIALS FVLNYEEGGE RNILHGDRES EAFLSEMVAA 70 80 90 100 110 120 QPLQGQRNMS MESLYEYGSR AGVWRILKLF KQFDIPLTIF AVAMAAQRHP DVIRAMVADG 130 140 150 160 170 180 HEICSHGYRW IDYQNMDEAQ EREHMRQAIQ ILTEISGERP LGWYTGRTGA NTRRLVMEEG 190 200 210 220 230 240 GFLYDCDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNNGE QFFQYLKDAF 250 260 270 280 290 300 DVLYAEGEDA PKMLSIGLHC RLIGRPARLA ALKRFIEYVK SHEQVWFTRR VDIARHWHTE HPFTGEAAQ

References

[1]

"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. , Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed: 12928499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016853 Genomic DNA. Translation: AAO57135.1.
RefSeq	NP_793440.1. NC_004578.1.
3D structure databases
ProteinModelPortal	Q87YX6.
SMR	Q87YX6. Positions 4-303.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1185331.
GenomeReviews	Gene locus PSPTO3666 in contig AE016853_GR.
KEGG	pst:PSPTO_3666.
NMPDR	fig|223283.1.peg.3578.
PATRIC	19998773. VBIPseSyr93040_3757.
TIGR	PSPTO3666.
Phylogenomic databases
HOGENOM	HBG367725.
OMA	DLPYWEP.
ProtClustDB	CLSK866619.
Enzyme and pathway databases
BioCyc	PSYR223283:PSPTO_3666-MONOMER.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR002509. Polysac_deacetylase. IPR017625. Urate_catabol_UraD_N. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03212. UraD_N-term-dom. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q87YX6_PSESM

Accession

Primary (citable) accession number: Q87YX6

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)