Reviewed,
UniProtKB/Swiss-Prot Q87YX4 (ALLC_PSESM)
Last modified
November 3, 2009.
Version 44.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Probable allantoicase EC=3.5.3.4 Alternative name(s): Allantoate amidinohydrolase | ||||
| Gene names |
| ||||
| Organism | Pseudomonas syringae pv. tomato [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 323 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas |
Protein attributes
| Sequence length | 331 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813 |
| Pathway | Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813 |
| Sequence similarities | Belongs to the allantoicase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Purine metabolism |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | allantoin catabolic process Inferred from electronic annotation. Source: HAMAP purine base metabolic processInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | allantoicase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 331 | 331 | Probable allantoicase HAMAP MF_00813 | PRO_0000205925 | |||
Sequences
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References
| [1] | "The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. Collmer A.Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed: 12928499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000. |
Cross-references
Sequence databases | |
|---|---|
| AE016853 Genomic DNA. Translation: AAO57137.1. | |
| RefSeq | NP_793442.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1O59 based on UniProtKB P25335. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1185333. |
| GenomeReviews | Gene locus PSPTO_3668 in contig AE016853_GR. |
| KEGG | pst:PSPTO_3668. |
| NMPDR | fig|223283.1.peg.3580. |
| TIGR | PSPTO_3668. |
Phylogenomic databases | |
| HOGENOM | Q87YX4. |
| OMA | SASLEAC. |
Enzyme and pathway databases | |
| BioCyc | PSYR223283:PSPTO_3668-MON. |
| BRENDA | 3.5.3.4. 289554. |
Family and domain databases | |
| HAMAP | MF_00813. [Tree] |
| InterPro | IPR005164. Allantoicase. IPR015908. Allantoicase_region. [Graphical view] |
| PANTHER | PTHR12045. Allantoicase. 1 hit. |
| Pfam | PF03561. Allantoicase. 2 hits. [Graphical view] |
| PIRSF | PIRSF016516. Allantoicase. 1 hit. |
| TIGRFAMs | TIGR02961. allantoicase. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | ALLC_PSESM | ||||||||
| Accession | Primary (citable) accession number: Q87YX4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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