Reviewed, UniProtKB/Swiss-Prot Q87YX4 (ALLC_PSESM)

Names and origin

Protein names

Recommended name:
    Probable allantoicase
    EC=3.5.3.4
Alternative name(s):
    Allantoate amidinohydrolase

Gene names

Name:	alc
Ordered Locus Names:	PSPTO_3668

Organism

Pseudomonas syringae pv. tomato [Complete proteome] [HAMAP]

Taxonomic identifier

323 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	331 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813
Pathway	Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813
Sequence similarities	Belongs to the allantoicase family.

Ontologies

Keywords
Biological process	Purine metabolism
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	allantoin catabolic process Inferred from electronic annotation. Source: HAMAP purine base metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	allantoicase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 331	331	Probable allantoicase HAMAP MF_00813		PRO_0000205925

Sequences

	Sequence		Length	Mass (Da)
	Q87YX4-1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 68672234D7701249	FASTA	331	36,737
	10 20 30 40 50 60 MKVYAAPFEK FVNLADARLG TKILSVTDDW FADANRLFQP TPAVWKEGVF DDNGKWMDGW 70 80 90 100 110 120 ESRRKRFEGY DSAVIKLGVA GTLKGVDIDT SFFTGNFPPS ASLEACFLAS GEPDENTAWT 130 140 150 160 170 180 EVLSSVELKG NSHHYHEISH DQAFSHLRFN IYPDGGVARL RVYGVPHRDW SKVTESEQID 190 200 210 220 230 240 LVAALNGGRS IACSDEHYGS MSNILNPGRG VNMGDGWETA RRRTPGNDWV IVALGHKGEV 250 260 270 280 290 300 EKVIVDTLHF KGNYPDSCSI QGAFVKGGTD SQIETQSLFW RELLPSQKLT MHAEHEFAEQ 310 320 330 VKAIGPITHI RLNVFPDGGV SRLRVLGKVS R

References

[1]

"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. , Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed: 12928499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE016853 Genomic DNA. Translation: AAO57137.1.
RefSeq	NP_793442.1.
3D structure databases
HSSP	HSSP built from PDB template 1O59 based on UniProtKB P25335.
ModBase	Search...
Genome annotation databases
GeneID	1185333.
GenomeReviews	Gene locus PSPTO_3668 in contig AE016853_GR.
KEGG	pst:PSPTO_3668.
NMPDR	fig|223283.1.peg.3580.
TIGR	PSPTO_3668.
Phylogenomic databases
HOGENOM	Q87YX4.
OMA	SASLEAC.
Enzyme and pathway databases
BioCyc	PSYR223283:PSPTO_3668-MON.
BRENDA	3.5.3.4. 289554.
Family and domain databases
HAMAP	MF_00813. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_region. [Graphical view]
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. [Graphical view]
PIRSF	PIRSF016516. Allantoicase. 1 hit.
TIGRFAMs	TIGR02961. allantoicase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ALLC_PSESM

Accession

Primary (citable) accession number: Q87YX4

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 13, 2005
Last sequence update:	June 1, 2003
Last modified:	November 3, 2009
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)