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Q87XP1

- Q87XP1_PSESM

UniProt

Q87XP1 - Q87XP1_PSESM

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Protein
Submitted name:

DNA ligase, ATP-dependent

Gene

PSPTO_4135

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-4199-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, ATP-dependentImported
Gene namesi
Ordered Locus Names:PSPTO_4135Imported
OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002515: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_4135.

Structurei

3D structure databases

ProteinModelPortaliQ87XP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.
PhylomeDBiQ87XP1.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87XP1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAFAELYAQ LDATTSSNAK LAAMRDYFEK AAAEDAAWAV YFLSGGRPRQ
60 70 80 90 100
LVPTRVLREQ AMTLASLPEW LFEESYQAVG DLAETLSLLL PQADHSNDEG
110 120 130 140 150
LATWMEDKLL PLRGLPPEEL AARLPMFWSQ LDRSSLMVCI KLITGSFRVG
160 170 180 190 200
VSKLLVTRAL AALADIDSKR VAQRLVGYTD LSHRPSAERY LKLIAPESED
210 220 230 240 250
EHAQRGGQPY PFFLAHSLQQ PADQFETLLG PAENWQVEWK WDGIRAQLVK
260 270 280 290 300
RDGRLWIWSR GEELVTDRFP ELHSLAQCLP DGTVIDGEIV VWKAPDINPD
310 320 330 340 350
ISHDSDAAFA LDNDAPNAAP SVQPFALLQQ RIGRKTLGKK ILTDIPVVVL
360 370 380 390 400
AYDLLEWQGA DWRSRPQHER RTQLETLIDS CQSEVLMPSP VLTGKDWLDL
410 420 430 440 450
ATQREASRSL GVEGMMLKAR DSLYGVGRTK DMGVWWKWKI DPFSVDAVLI
460 470 480 490 500
YAQRGHGRRA SLYSDYTFAV WDGPPEASER TLVPFAKAYS GLTDEEMRKV
510 520 530 540 550
DAIVRKTTVE KFGPVSSVTP TLVFELGFEG IALSKRHKSG IAVRFPRMLR
560 570
WRQDKPVAEA DSLTTLQDLL N
Length:571
Mass (Da):64,128
Last modified:June 1, 2003 - v1
Checksum:iCFEB9CCAE10242F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO57591.1.
RefSeqiNP_793896.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO57591; AAO57591; PSPTO_4135.
GeneIDi1185815.
KEGGipst:PSPTO_4135.
PATRICi19999767. VBIPseSyr93040_4245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO57591.1 .
RefSeqi NP_793896.1. NC_004578.1.

3D structure databases

ProteinModelPortali Q87XP1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 223283.PSPTO_4135.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO57591 ; AAO57591 ; PSPTO_4135 .
GeneIDi 1185815.
KEGGi pst:PSPTO_4135.
PATRICi 19999767. VBIPseSyr93040_4245.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.
PhylomeDBi Q87XP1.

Enzyme and pathway databases

BioCyci PSYR223283:GJIX-4199-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000Imported.

Entry informationi

Entry nameiQ87XP1_PSESM
AccessioniPrimary (citable) accession number: Q87XP1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: October 1, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3