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Protein
Submitted name:

Metal ion transporter, putative

Gene

PSPTO_4807

Organism
Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei74AMP; via amide nitrogen and carbonyl oxygenCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi94 – 96AMPCombined sources3
Nucleotide bindingi175 – 178AMPCombined sources4

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-4786-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Metal ion transporter, putativeImported
Gene namesi
Ordered Locus Names:PSPTO_4807Imported
OrganismiPseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002515 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_4807.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3LFRX-ray1.53A/B59-194[»]
ProteinModelPortaliQ87VX8.
SMRiQ87VX8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini67 – 127CBSInterPro annotationAdd BLAST61
Domaini133 – 193CBSInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108JU5. Bacteria.
COG4535. LUCA.
HOGENOMiHOG000062294.
KOiK06189.
OMAiQMISIKA.
OrthoDBiPOG091H025R.
PhylomeDBiQ87VX8.

Family and domain databases

Gene3Di3.30.465.10. 1 hit.
InterProiIPR000644. CBS_dom.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR005170. Transptr-assoc_dom.
[Graphical view]
PfamiPF00571. CBS. 2 hits.
PF03471. CorC_HlyC. 1 hit.
[Graphical view]
SMARTiSM00116. CBS. 2 hits.
SM01091. CorC_HlyC. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51371. CBS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87VX8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEDRSSNGQ KSWLGKLTQA FVHEPKNRQE LLELLREAHQ NKLLDSEALA
60 70 80 90 100
IVEGAIQVAD LQVRDIMVPR SQMISIKATQ TPREFLPAVI DAAHSRYPVI
110 120 130 140 150
GESHDDVLGV LLAKDLLPLI LKADGDSDDV KKLLRPATFV PESKRLNVLL
160 170 180 190 200
REFRANHNHM AIVIDEYGGV AGLVTIEDVL EQIVGDIEDE HDVEEDSYIK
210 220 230 240 250
PLPSGDFLVK ALTPIENFNE FFDSVFSDDE FDTVGGLVMN AFGHLPKRNE
260 270 280
ITEIGAYRFR ILSADSRRIH LLRVSPISRP
Length:280
Mass (Da):31,395
Last modified:June 1, 2003 - v1
Checksum:i53270B9E8A872ECC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO58236.1.
RefSeqiNP_794541.1. NC_004578.1.
WP_007243836.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO58236; AAO58236; PSPTO_4807.
GeneIDi1186490.
KEGGipst:PSPTO_4807.
PATRICi20001120. VBIPseSyr93040_4918.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO58236.1.
RefSeqiNP_794541.1. NC_004578.1.
WP_007243836.1. NC_004578.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3LFRX-ray1.53A/B59-194[»]
ProteinModelPortaliQ87VX8.
SMRiQ87VX8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223283.PSPTO_4807.

Protocols and materials databases

DNASUi1186490.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO58236; AAO58236; PSPTO_4807.
GeneIDi1186490.
KEGGipst:PSPTO_4807.
PATRICi20001120. VBIPseSyr93040_4918.

Phylogenomic databases

eggNOGiENOG4108JU5. Bacteria.
COG4535. LUCA.
HOGENOMiHOG000062294.
KOiK06189.
OMAiQMISIKA.
OrthoDBiPOG091H025R.
PhylomeDBiQ87VX8.

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-4786-MONOMER.

Family and domain databases

Gene3Di3.30.465.10. 1 hit.
InterProiIPR000644. CBS_dom.
IPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR005170. Transptr-assoc_dom.
[Graphical view]
PfamiPF00571. CBS. 2 hits.
PF03471. CorC_HlyC. 1 hit.
[Graphical view]
SMARTiSM00116. CBS. 2 hits.
SM01091. CorC_HlyC. 1 hit.
[Graphical view]
SUPFAMiSSF56176. SSF56176. 1 hit.
PROSITEiPS51371. CBS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ87VX8_PSESM
AccessioniPrimary (citable) accession number: Q87VX8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.