Q87VC4 (Q87VC4_PSESM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lyase, putative EMBL AAO58443.1

Gene names

Ordered Locus Names:

PSPTO_5015 EMBL AAO58443.1

Organism

Pseudomonas syringae pv. tomato (strain DC3000) [Complete proteome] [HAMAP]

Taxonomic identifier

223283 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	223 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL AAO58443.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87VC4 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 23B172A73018A4B7	FASTA	223	25,203
	10 20 30 40 50 60 MIDLGSYQLS IPVGSPPKTI TTAQLVKGYD GKYFKSKSDS IVFWSPVTGT KTENAKYSRS 70 80 90 100 110 120 ELRETWSDGT LRNWVYPDAD NYLNAKLEVD QVPSSGKIVI GQIHAYESTE PLLKVEYQYK 130 140 150 160 170 180 EDTKTGDIVA KVRNRYDDDD SKVYTIVEGV KLNQTFNYVI HLSKGGKLTV SINDTDWSKS 190 200 210 220 ISKTWRDKPL YFKAGVYTQD NTGYTSEGGK ATFYNLDIDH NKS

References

[1]

"The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000." Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R., Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.M., Zafar N. , Zhou L., Liu J., Yuan Q., Khouri H.M., Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R., Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R., Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A. Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003) [PubMed: 12928499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DC3000.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016853 Genomic DNA. Translation: AAO58443.1.
RefSeq	NP_794748.1. NC_004578.1.
3D structure databases
ProteinModelPortal	Q87VC4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1186700.
GenomeReviews	Gene locus PSPTO5015 in contig AE016853_GR.
KEGG	pst:PSPTO_5015.
NMPDR	fig|223283.1.peg.4886.
PATRIC	20001558. VBIPseSyr93040_5135.
TIGR	PSPTO5015.
Phylogenomic databases
HOGENOM	HBG638857.
OMA	NTGYTSE.
ProtClustDB	CLSK866376.
Enzyme and pathway databases
BioCyc	PSYR223283:PSPTO_5015-MONOMER.
Family and domain databases
InterPro	IPR014895. Alginate_lyase_2. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF08787. Alginate_lyase2. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q87VC4_PSESM

Accession

Primary (citable) accession number: Q87VC4

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)