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Q87V03

- SYR_PSESM

UniProt

Q87V03 - SYR_PSESM

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Protein
Arginine--tRNA ligase
Gene
argS, PSPTO_5138
Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-HAMAP
  2. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-5205-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligase (EC:6.1.1.19)
Alternative name(s):
Arginyl-tRNA synthetase
Short name:
ArgRS
Gene namesi
Name:argS
Ordered Locus Names:PSPTO_5138
OrganismiPseudomonas syringae pv. tomato (strain DC3000)
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002515: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 578578Arginine--tRNA ligaseUniRule annotation
PRO_0000151594Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi223283.PSPTO_5138.

Structurei

3D structure databases

ProteinModelPortaliQ87V03.

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi127 – 13711"HIGH" regionUniRule annotation
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247212.
KOiK01887.
OMAiMEHMGFG.
OrthoDBiEOG6JB13C.
PhylomeDBiQ87V03.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87V03-1 [UniParc]FASTAAdd to Basket

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MKDTIRQLIQ QALTRLVTEG VLPEGLTPAI QVENARDKTH GDFASNIAMM    50
LAKPAGMKPR DLAEKLIAAL PADEQVSKVE IAGPGFLNFF QNTAALASRL 100
DAALSDPQLS VRKAGAAQRV VVDLSAPNLA KEMHVGHLRS TIIGDGVANV 150
LEFLGDTVIR QNHVGDWGTQ FGMLLAYLQE KPATSDELSD LENFYRAAKQ 200
RFDESEEFAE RARGLVVKLQ AGDAECLTLW TRFKDISLSH CQQTYERLNV 250
KLTPADVMGE SAYNDDLANV VNDLKAAGLL VESNGAQCVF LEEFRTADDT 300
PLPVIVQKAG GGYLYATTDL AAIRYRSKVL KADRALYFVD QRQALHFQQV 350
FEVARRAGFV HEGMQLEHMG FGTMNGADGR PFKTRDGGTV KLIDLLDEAQ 400
ERAYTLVKEK NPQVAEAELR SIAKAVGISA VKYADLSKHR ASDYSFNFDQ 450
MLSFEGNTAP YLLYAYTRVA GVFRKLGTPF DASKGHIVLE APQEQELAAR 500
LAQFNETLNN VAEKGTPHVL CAYLYDLAGL FSSFYENCPI LGAENPDQQQ 550
SRLRLAALTG RTLKQGLDLL GLETLERM 578
Length:578
Mass (Da):63,640
Last modified:June 1, 2003 - v1
Checksum:i7DA9D2D7377CDB07
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016853 Genomic DNA. Translation: AAO58565.1.
RefSeqiNP_794870.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO58565; AAO58565; PSPTO_5138.
GeneIDi1186823.
KEGGipst:PSPTO_5138.
PATRICi20001804. VBIPseSyr93040_5258.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE016853 Genomic DNA. Translation: AAO58565.1 .
RefSeqi NP_794870.1. NC_004578.1.

3D structure databases

ProteinModelPortali Q87V03.
ModBasei Search...

Protein-protein interaction databases

STRINGi 223283.PSPTO_5138.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAO58565 ; AAO58565 ; PSPTO_5138 .
GeneIDi 1186823.
KEGGi pst:PSPTO_5138.
PATRICi 20001804. VBIPseSyr93040_5258.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247212.
KOi K01887.
OMAi MEHMGFG.
OrthoDBi EOG6JB13C.
PhylomeDBi Q87V03.

Enzyme and pathway databases

BioCyci PSYR223283:GJIX-5205-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000.

Entry informationi

Entry nameiSYR_PSESM
AccessioniPrimary (citable) accession number: Q87V03
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: June 1, 2003
Last modified: July 9, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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