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Protein
Submitted name:

Uncharacterized protein

Gene

PSPTO_5518

Organism
Pseudomonas syringae pv. tomato (strain DC3000)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi101 – 1011CalciumCombined sources
Metal bindingi103 – 1031CalciumCombined sources
Metal bindingi105 – 1051CalciumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-5591-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PSPTO_5518Imported
OrganismiPseudomonas syringae pv. tomato (strain DC3000)Imported
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002515 Componenti: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PAGX-ray1.60A1-135[»]
ProteinModelPortaliQ87TZ9.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ87TZ9.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105QBZ. Bacteria.
ENOG4111TNK. LUCA.
HOGENOMiHOG000287695.
OMAiDYYCVEE.
OrthoDBiEOG6JQH5S.
PhylomeDBiQ87TZ9.

Family and domain databases

Gene3Di3.40.1580.10. 1 hit.
InterProiIPR018958. SMI1/KNR4-like_dom.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87TZ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEVIEQLRE ANEPVPVPLE LPDEDQLVEI EEQLFINIPF VFKEFLLTVS
60 70 80 90 100
DVVYGSLEPV TVTDPQSHTY LPEVCATAWD LGVPRELIPI CQDGEDYYCV
110 120 130
EEDGTVLLWS AEEELVTEES WESVWHWARD VWLES
Length:135
Mass (Da):15,625
Last modified:June 1, 2003 - v1
Checksum:i17BDC3006F91F7BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO58937.1.
RefSeqiNP_795242.1. NC_004578.1.
WP_005768316.1. NC_004578.1.

Genome annotation databases

EnsemblBacteriaiAAO58937; AAO58937; PSPTO_5518.
GeneIDi1187210.
KEGGipst:PSPTO_5518.
PATRICi20002610. VBIPseSyr93040_5654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA. Translation: AAO58937.1.
RefSeqiNP_795242.1. NC_004578.1.
WP_005768316.1. NC_004578.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PAGX-ray1.60A1-135[»]
ProteinModelPortaliQ87TZ9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO58937; AAO58937; PSPTO_5518.
GeneIDi1187210.
KEGGipst:PSPTO_5518.
PATRICi20002610. VBIPseSyr93040_5654.

Phylogenomic databases

eggNOGiENOG4105QBZ. Bacteria.
ENOG4111TNK. LUCA.
HOGENOMiHOG000287695.
OMAiDYYCVEE.
OrthoDBiEOG6JQH5S.
PhylomeDBiQ87TZ9.

Enzyme and pathway databases

BioCyciPSYR223283:GJIX-5591-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ87TZ9.

Family and domain databases

Gene3Di3.40.1580.10. 1 hit.
InterProiIPR018958. SMI1/KNR4-like_dom.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DC3000Imported.
  2. "Crystal structure of conserved hypothetical protein from Pseudomonas syringae pv. tomato."
    Fedorov A.A., Ramagopal U., Toro R., Fedorov E.V., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (MAR-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS) IN COMPLEX WITH CALCIUM.

Entry informationi

Entry nameiQ87TZ9_PSESM
AccessioniPrimary (citable) accession number: Q87TZ9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 16, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.