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Protein
Submitted name:

Mannitol operon repressor

Gene

VP0368

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-379-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Mannitol operon repressorImported
Gene namesi
Ordered Locus Names:VP0368Imported
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi223926.VP0368.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3BRJX-ray2.75A/B/C/D1-172[»]
ProteinModelPortaliQ87SQ4.
SMRiQ87SQ4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ87SQ4.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105E61. Bacteria.
COG3722. LUCA.
HOGENOMiHOG000271380.
KOiK02562.
OMAiNFAVQSV.

Family and domain databases

InterProiIPR007761. MtlR.
[Graphical view]
PfamiPF05068. MtlR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87SQ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADNINESEI IERLNSAPSV RGFFIATVDV FNESIDGLIQ RIFRKDNFAV
60 70 80 90 100
QSVVGPLLQD SGPLGDLSVR LKLLFGLGVL PDDIYHDIED IIKLKNHLNS
110 120 130 140 150
DASDYEFTDP NILEPIKKLH LVKKMGMVQL EVNEPDDDID LEFYQLQLQR
160 170
QQQIIKSGLS LAIVEICNEL GKDSPF
Length:176
Mass (Da):19,853
Last modified:June 1, 2003 - v1
Checksum:i635EFE445BD5D40F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC58631.1.
RefSeqiNP_796747.1. NC_004603.1.
WP_005468084.1. NC_004603.1.

Genome annotation databases

EnsemblBacteriaiBAC58631; BAC58631; BAC58631.
GeneIDi1187835.
KEGGivpa:VP0368.
PATRICi20138958. VBIVibPar50997_0354.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC58631.1.
RefSeqiNP_796747.1. NC_004603.1.
WP_005468084.1. NC_004603.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3BRJX-ray2.75A/B/C/D1-172[»]
ProteinModelPortaliQ87SQ4.
SMRiQ87SQ4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223926.VP0368.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC58631; BAC58631; BAC58631.
GeneIDi1187835.
KEGGivpa:VP0368.
PATRICi20138958. VBIVibPar50997_0354.

Phylogenomic databases

eggNOGiENOG4105E61. Bacteria.
COG3722. LUCA.
HOGENOMiHOG000271380.
KOiK02562.
OMAiNFAVQSV.

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-379-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ87SQ4.

Family and domain databases

InterProiIPR007761. MtlR.
[Graphical view]
PfamiPF05068. MtlR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ87SQ4_VIBPA
AccessioniPrimary (citable) accession number: Q87SQ4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.