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Protein

Glycogen synthase

Gene

glgA

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei20ADP-glucoseUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processGlycogen biosynthesis

Enzyme and pathway databases

BioCyciVPAR223926:G1GTB-1072-MONOMER
UniPathwayiUPA00164

Protein family/group databases

CAZyiGT5 Glycosyltransferase Family 5

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:VP1024
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001886611 – 485Glycogen synthaseAdd BLAST485

Proteomic databases

PRIDEiQ87QX5

Interactioni

Protein-protein interaction databases

STRINGi223926.VP1024

Structurei

3D structure databases

ProteinModelPortaliQ87QX5
SMRiQ87QX5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CXW Bacteria
COG0297 LUCA
HOGENOMiHOG000294940
KOiK00703
OMAiCAPVIKA

Family and domain databases

HAMAPiMF_00484 Glycogen_synth, 1 hit
InterProiView protein in InterPro
IPR001296 Glyco_trans_1
IPR011835 GS/SS
IPR013534 Starch_synth_cat_dom
PfamiView protein in Pfam
PF08323 Glyco_transf_5, 1 hit
PF00534 Glycos_transf_1, 1 hit
TIGRFAMsiTIGR02095 glgA, 1 hit

Sequencei

Sequence statusi: Complete.

Q87QX5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATNNLSILF VASEVEGLIK SGGLADVAKA LPEALQNLQQ DVRITIPAYT
60 70 80 90 100
SIERLADAEV VLETNLTSWP HTKYRVLLLT LGNNPVYLID CDPYFNRPSM
110 120 130 140 150
YAENNQAYTD NGERFAFFSA ACLDMLPKLA FQPDIIHAND WHTGLVPFLL
160 170 180 190 200
KHRYGNDPFF AHTKSVISIH NAVFKGVFSY DDVQCLPEFH CRNVPDAAVS
210 220 230 240 250
ATHITMLKAG VMNADKINAV SPTYAEELKT ELGSHGMAWE FQQRAGDLVG
260 270 280 290 300
ILNGCDYSAW NPETDIYLPM NYSADKQSMV LGKNTCKRAL QQRLNLAEKD
310 320 330 340 350
VAMFGMVCRL TQQKGVHYLL PALADFLKHD VQVVVVGTGD PVLAAQLEEV
360 370 380 390 400
AAQFSDKFVF VEAYDNELAH LVEAGSDFFL MPSEFEPCGL NQIYSMAYGT
410 420 430 440 450
LPIVRGVGGL KDSVNDYDVD PCDATGFVFY EPTSQALLLT MLRALLLYAQ
460 470 480
NLTEVQRVQL HAMQKDFCWR KAAESYLQLY RSALN
Length:485
Mass (Da):54,047
Last modified:June 1, 2003 - v1
Checksum:iA4971F2AF9CC5330
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA Translation: BAC59287.1
RefSeqiNP_797403.1, NC_004603.1
WP_005483115.1, NC_004603.1

Genome annotation databases

EnsemblBacteriaiBAC59287; BAC59287; BAC59287
GeneIDi1188528
KEGGivpa:VP1024
PATRICifig|223926.6.peg.971

Similar proteinsi

Entry informationi

Entry nameiGLGA_VIBPA
AccessioniPrimary (citable) accession number: Q87QX5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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