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Q87QX5

- GLGA_VIBPA

UniProt

Q87QX5 - GLGA_VIBPA

Protein

Glycogen synthase

Gene

glgA

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei20 – 201ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciVPAR223926:GHK4-1072-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:VP1024
    OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
    Taxonomic identifieri223926 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002493: Chromosome 1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 485485Glycogen synthasePRO_0000188661Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi223926.VP1024.

    Structurei

    3D structure databases

    ProteinModelPortaliQ87QX5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.
    KOiK00703.
    OMAiRYPHCIN.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q87QX5-1 [UniParc]FASTAAdd to Basket

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    MATNNLSILF VASEVEGLIK SGGLADVAKA LPEALQNLQQ DVRITIPAYT    50
    SIERLADAEV VLETNLTSWP HTKYRVLLLT LGNNPVYLID CDPYFNRPSM 100
    YAENNQAYTD NGERFAFFSA ACLDMLPKLA FQPDIIHAND WHTGLVPFLL 150
    KHRYGNDPFF AHTKSVISIH NAVFKGVFSY DDVQCLPEFH CRNVPDAAVS 200
    ATHITMLKAG VMNADKINAV SPTYAEELKT ELGSHGMAWE FQQRAGDLVG 250
    ILNGCDYSAW NPETDIYLPM NYSADKQSMV LGKNTCKRAL QQRLNLAEKD 300
    VAMFGMVCRL TQQKGVHYLL PALADFLKHD VQVVVVGTGD PVLAAQLEEV 350
    AAQFSDKFVF VEAYDNELAH LVEAGSDFFL MPSEFEPCGL NQIYSMAYGT 400
    LPIVRGVGGL KDSVNDYDVD PCDATGFVFY EPTSQALLLT MLRALLLYAQ 450
    NLTEVQRVQL HAMQKDFCWR KAAESYLQLY RSALN 485
    Length:485
    Mass (Da):54,047
    Last modified:June 1, 2003 - v1
    Checksum:iA4971F2AF9CC5330
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000031 Genomic DNA. Translation: BAC59287.1.
    RefSeqiNP_797403.1. NC_004603.1.

    Genome annotation databases

    EnsemblBacteriaiBAC59287; BAC59287; BAC59287.
    GeneIDi1188528.
    KEGGivpa:VP1024.
    PATRICi20140266. VBIVibPar50997_0971.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000031 Genomic DNA. Translation: BAC59287.1 .
    RefSeqi NP_797403.1. NC_004603.1.

    3D structure databases

    ProteinModelPortali Q87QX5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 223926.VP1024.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC59287 ; BAC59287 ; BAC59287 .
    GeneIDi 1188528.
    KEGGi vpa:VP1024.
    PATRICi 20140266. VBIVibPar50997_0971.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.
    KOi K00703.
    OMAi RYPHCIN.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci VPAR223926:GHK4-1072-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae."
      Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.
      Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RIMD 2210633.

    Entry informationi

    Entry nameiGLGA_VIBPA
    AccessioniPrimary (citable) accession number: Q87QX5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 25, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3