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Protein
Submitted name:

Putative glutamate decarboxylase

Gene

VP1237

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
LigandPyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciVPAR223926:G1GTB-1285-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Putative glutamate decarboxylaseImported
Gene namesi
Ordered Locus Names:VP1237Imported
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei338N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi223926.VP1237

Structurei

3D structure databases

ProteinModelPortaliQ87QB3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili459 – 479Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105DY8 Bacteria
COG0076 LUCA
HOGENOMiHOG000282553
KOiK01580
OMAiFHKHFFQ

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR022517 Asp_decarboxylase_pyridox
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR03799 NOD_PanD_pyr, 1 hit

Sequencei

Sequence statusi: Complete.

Q87QB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKEQKTADV SFESLLKIFT VPEGPDSTLT KIDESLSRNL NQFLREHIVA
60 70 80 90 100
EEKPLREIEK DFSSAQIPEQ PEFVSDHTEH LLDTLVSHSV HTSAPSFIGH
110 120 130 140 150
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMLHRLIYGQ
160 170 180 190 200
NDKFYRKWMH SANHSLGAFC SGGTIANITA LWVARNKALK ADGAFNGVEK
210 220 230 240 250
EGLFKAMKHY GYEGLAVLVS ERGHYSLKKA ADVLGLGQEG LVAVKTDANN
260 270 280 290 300
RIVVDDLKTK IAELKEQNIK PIAVIGVAGT TETGSVDPLS QIAQVCQEHN
310 320 330 340 350
CHFHVDAAWG GATLMSNHYR HLLEGVELAD SVTIDAHKQL YIPMGAGMVL
360 370 380 390 400
FKDPDAMKSI EHHAQYILRK GSKDLGSHTL EGSRSGMAML VYAAMHIISR
410 420 430 440 450
PGYELLIDQS IEKARYFADL IKQQDDFELV SEPELCLLTY RYLPPLIREA
460 470 480 490 500
LDKAEGTQKE KLNELINQLT QFIQKRQRET GKSFVSRTRL NPDQWQRMNT
510 520 530 540
IVFRVVLANP LTTRDILSSV LDEQREIAKQ APSLTAKIEE MASDILGA
Length:548
Mass (Da):61,268
Last modified:June 1, 2003 - v1
Checksum:iCD0473BE69A9EE06
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA Translation: BAC59500.1
RefSeqiNP_797616.1, NC_004603.1
WP_005483514.1, NC_004603.1

Genome annotation databases

EnsemblBacteriaiBAC59500; BAC59500; BAC59500
GeneIDi1188742
KEGGivpa:VP1237
PATRICifig|223926.6.peg.1176

Similar proteinsi

Entry informationi

Entry nameiQ87QB3_VIBPA
AccessioniPrimary (citable) accession number: Q87QB3
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 28, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health