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Protein
Submitted name:

Putative type III secretion protein YscC

Gene

VP1696

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-1746-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion protein YscCImported
Gene namesi
Ordered Locus Names:VP1696Imported
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_500430337735 – 632Sequence analysisAdd BLAST598

Interactioni

Protein-protein interaction databases

STRINGi223926.VP1696.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini192 – 301Secretin_NInterPro annotationAdd BLAST110

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87P22-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTVMRTLMP KIGRIAAKMT LCALCVAPMF SVQATELNWP EQPFRYYADN
60 70 80 90 100
DSLKDLLNNF GANYRVSVSV SDKVNDRVSG RFTPEDPAEF LDYLAQVYNL
110 120 130 140 150
MWYFDGAVLH VYKATETRSR LLQLELLTAR ELRSTLISTG VWDARYGWRA
160 170 180 190 200
AENKGLVYLA GPPRYVELVV QTAEALESRL LQKSNSTDEL FVELIPLKYA
210 220 230 240 250
SATDRSISYR DQSITVPGIA SVLSRVVGGV QTQITDSASV QTSSVNGLPA
260 270 280 290 300
EAAKPRGKTA SVHGGATVEA EPGLNAIIVR DTQARLPLYR KLVAQLDQPQ
310 320 330 340 350
SRIEVALSIV DISANDLRQL GVDWRAGVSV GNNRIVDIKT TGDVDNGDVT
360 370 380 390 400
LGSGQSFKSL LDSTNLNYLL AQIRLLESKG SAQVVSRPTL LTQENVEAVL
410 420 430 440 450
NNSSTFYVKL VGKETAALEE VTYGTLLRIV PRIVGDRFAT RPEINLSLHL
460 470 480 490 500
EDGAKIPDGG VDDLPSVRKT EISTLATVKQ GQSLLIGGVY RDEVSHQLRK
510 520 530 540 550
VPLLGDIPYL GALFRSNTNT TRRTVRMFII EPRIVVDGIG DSVLIGNEHD
560 570 580 590 600
LRPSIGQLNN ISNNSAEFKS VVEVFSCTSK TQAERYQQDL LSQQKSSLLT
610 620 630
QCQLPSGQVG WRVKVAECDL SQAECVRPSE EP
Length:632
Mass (Da):69,420
Last modified:June 1, 2003 - v1
Checksum:i51E7A9369A7D1F0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC59959.1.
RefSeqiNP_798075.1. NC_004603.1.
WP_011105906.1. NC_004603.1.

Genome annotation databases

EnsemblBacteriaiBAC59959; BAC59959; BAC59959.
GeneIDi1189203.
KEGGivpa:VP1696.
PATRICi20141568. VBIVibPar50997_1619.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC59959.1.
RefSeqiNP_798075.1. NC_004603.1.
WP_011105906.1. NC_004603.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223926.VP1696.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC59959; BAC59959; BAC59959.
GeneIDi1189203.
KEGGivpa:VP1696.
PATRICi20141568. VBIVibPar50997_1619.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-1746-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ87P22_VIBPA
AccessioniPrimary (citable) accession number: Q87P22
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.