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Protein
Submitted name:

Putative type III secretion protein YscC

Gene

VP1696

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

BioCyciVPAR223926:G1GTB-1746-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion protein YscCImported
Gene namesi
Ordered Locus Names:VP1696Imported
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_500430337735 – 632Sequence analysisAdd BLAST598

Interactioni

Protein-protein interaction databases

STRINGi223926.VP1696

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini192 – 301Secretin_NInterPro annotationAdd BLAST110

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44 Bacteria
COG1450 LUCA
HOGENOMiHOG000219614
KOiK03219
OMAiYLMARIS

Family and domain databases

Gene3Di3.30.1370.120, 2 hits
InterProiView protein in InterPro
IPR005644 NolW-like
IPR038591 NolW-like_sf
IPR004846 T2SS/T3SS
IPR004845 T2SS_GspD_CS
IPR003522 T3SS_OM_pore_YscC
PfamiView protein in Pfam
PF00263 Secretin, 1 hit
PF03958 Secretin_N, 1 hit
PRINTSiPR01337 TYPE3OMGPROT
TIGRFAMsiTIGR02516 type_III_yscC, 1 hit
PROSITEiView protein in PROSITE
PS00875 T2SP_D, 1 hit

Sequencei

Sequence statusi: Complete.

Q87P22-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTVMRTLMP KIGRIAAKMT LCALCVAPMF SVQATELNWP EQPFRYYADN
60 70 80 90 100
DSLKDLLNNF GANYRVSVSV SDKVNDRVSG RFTPEDPAEF LDYLAQVYNL
110 120 130 140 150
MWYFDGAVLH VYKATETRSR LLQLELLTAR ELRSTLISTG VWDARYGWRA
160 170 180 190 200
AENKGLVYLA GPPRYVELVV QTAEALESRL LQKSNSTDEL FVELIPLKYA
210 220 230 240 250
SATDRSISYR DQSITVPGIA SVLSRVVGGV QTQITDSASV QTSSVNGLPA
260 270 280 290 300
EAAKPRGKTA SVHGGATVEA EPGLNAIIVR DTQARLPLYR KLVAQLDQPQ
310 320 330 340 350
SRIEVALSIV DISANDLRQL GVDWRAGVSV GNNRIVDIKT TGDVDNGDVT
360 370 380 390 400
LGSGQSFKSL LDSTNLNYLL AQIRLLESKG SAQVVSRPTL LTQENVEAVL
410 420 430 440 450
NNSSTFYVKL VGKETAALEE VTYGTLLRIV PRIVGDRFAT RPEINLSLHL
460 470 480 490 500
EDGAKIPDGG VDDLPSVRKT EISTLATVKQ GQSLLIGGVY RDEVSHQLRK
510 520 530 540 550
VPLLGDIPYL GALFRSNTNT TRRTVRMFII EPRIVVDGIG DSVLIGNEHD
560 570 580 590 600
LRPSIGQLNN ISNNSAEFKS VVEVFSCTSK TQAERYQQDL LSQQKSSLLT
610 620 630
QCQLPSGQVG WRVKVAECDL SQAECVRPSE EP
Length:632
Mass (Da):69,420
Last modified:June 1, 2003 - v1
Checksum:i51E7A9369A7D1F0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA Translation: BAC59959.1
RefSeqiNP_798075.1, NC_004603.1
WP_011105906.1, NC_004603.1

Genome annotation databases

EnsemblBacteriaiBAC59959; BAC59959; BAC59959
GeneIDi1189203
KEGGivpa:VP1696
PATRICifig|223926.6.peg.1619

Similar proteinsi

Entry informationi

Entry nameiQ87P22_VIBPA
AccessioniPrimary (citable) accession number: Q87P22
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 28, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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