Q87NG8 (Q87NG8_VIBPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aspartate aminotransferase EMBL BAC60163.1

Gene names

Ordered Locus Names:

VP1900

Organism

Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) [Complete proteome] [HAMAP]

Taxonomic identifier

223926 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio harveyi group › Vibrio parahaemolyticus

Protein attributes

Sequence length	414 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000479
Sequence similarities	Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU000479

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000479
Molecular function	Aminotransferase RuleBase RU000481 EMBL BAC60163.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	biosynthetic process Inferred from electronic annotation. Source: InterPro cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87NG8 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 37CF8B4B650AE523	FASTA	414	45,478
	10 20 30 40 50 60 MLKGINTSRP LRLTWMKIMF EKVVAAPADP ILGLTEEFKK DPRAEKINLG VGIYKNEQGE 70 80 90 100 110 120 TPVLATVKKA EAALIETEKT KSYLTIEGTA EYGLAVQKLL FGADAEIVAE KRAKTAQAPG 130 140 150 160 170 180 GTGALRVAGE FIKRQLGNVK IWISNPTWAN HNGVFTAAGL ETAQYTYYNA ETKDKDFDAM 190 200 210 220 230 240 LNDLQAASEG DIVLLHGCCH NPTGIDPTAE EWETLAKLIA EKKLLPLFDF AYQGFAKGVE 250 260 270 280 290 300 EDAAGLRIFA KYNKEILVAS SFSKNFGLYN ERVGAFTLVA ESEEVATTAF SQVKAIIRSI 310 320 330 340 350 360 YSNPPAHGSA VVTHILNNKE LRAEWEAEVQ EMRDRIQEMR ELFVATLKEE GVDADFSFIE 370 380 390 400 410 RQNGMFSFSG LSKEQVNRLK DEFAIYIVGS GRISVAGMTK SNMGPLCKGI AAVL

References

[1]

"Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae." Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T. Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RIMD 2210633.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000031 Genomic DNA. Translation: BAC60163.1.
RefSeq	NP_798279.2. NC_004603.1.
3D structure databases
HSSP	HSSP built from PDB template 1ART based on UniProtKB P00509.
ProteinModelPortal	Q87NG8.
ModBase	Search...
Protein-protein interaction databases
STRING	223926.VP1900.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAC60163; BAC60163; BAC60163.
GeneID	1189407.
KEGG	vpa:VP1900.
PATRIC	20141960. VBIVibPar50997_1815.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000185899.
KO	K00832.
OMA	EFAIYIV.
ProtClustDB	PRK09257.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR004839. Aminotransferase_I/II. IPR000796. Asp_trans. IPR004838. NHTrfase_class1_PyrdxlP-BS. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11879. PTHR11879. 1 hit.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
PRINTS	PR00799. TRANSAMINASE.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00105. AA_TRANSFER_CLASS_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q87NG8_VIBPA

Accession

Primary (citable) accession number: Q87NG8

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	May 1, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)