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Protein

Aminotransferase

Gene

VP1900

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
AminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Ordered Locus Names:VP1900Imported
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi223926.VP1900.

Structurei

3D structure databases

ProteinModelPortaliQ87NG8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 409Aminotran_1_2InterPro annotationAdd BLAST365

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili315 – 342Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87NG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKGINTSRP LRLTWMKIMF EKVVAAPADP ILGLTEEFKK DPRAEKINLG
60 70 80 90 100
VGIYKNEQGE TPVLATVKKA EAALIETEKT KSYLTIEGTA EYGLAVQKLL
110 120 130 140 150
FGADAEIVAE KRAKTAQAPG GTGALRVAGE FIKRQLGNVK IWISNPTWAN
160 170 180 190 200
HNGVFTAAGL ETAQYTYYNA ETKDKDFDAM LNDLQAASEG DIVLLHGCCH
210 220 230 240 250
NPTGIDPTAE EWETLAKLIA EKKLLPLFDF AYQGFAKGVE EDAAGLRIFA
260 270 280 290 300
KYNKEILVAS SFSKNFGLYN ERVGAFTLVA ESEEVATTAF SQVKAIIRSI
310 320 330 340 350
YSNPPAHGSA VVTHILNNKE LRAEWEAEVQ EMRDRIQEMR ELFVATLKEE
360 370 380 390 400
GVDADFSFIE RQNGMFSFSG LSKEQVNRLK DEFAIYIVGS GRISVAGMTK
410
SNMGPLCKGI AAVL
Length:414
Mass (Da):45,478
Last modified:June 1, 2003 - v1
Checksum:i37CF8B4B650AE523
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC60163.1.
RefSeqiNP_798279.2. NC_004603.1.

Genome annotation databases

EnsemblBacteriaiBAC60163; BAC60163; BAC60163.
GeneIDi1189407.
KEGGivpa:VP1900.
PATRICi20141960. VBIVibPar50997_1815.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC60163.1.
RefSeqiNP_798279.2. NC_004603.1.

3D structure databases

ProteinModelPortaliQ87NG8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223926.VP1900.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC60163; BAC60163; BAC60163.
GeneIDi1189407.
KEGGivpa:VP1900.
PATRICi20141960. VBIVibPar50997_1815.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185899.
KOiK00832.
OMAiPNHKGVF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ87NG8_VIBPA
AccessioniPrimary (citable) accession number: Q87NG8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.