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Protein

UPF0352 protein VP2129

Gene

VP2129

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-2184-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0352 protein VP2129UniRule annotation
Gene namesi
Ordered Locus Names:VP2129
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002018031 – 75UPF0352 protein VP2129Add BLAST75

Interactioni

Protein-protein interaction databases

STRINGi223926.VP2129.

Structurei

Secondary structure

175
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi9 – 25Combined sources17
Helixi30 – 47Combined sources18
Helixi51 – 68Combined sources18

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2JPQNMR-A/B1-75[»]
ProteinModelPortaliQ87MV2.
SMRiQ87MV2.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ87MV2.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0352 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105YDX. Bacteria.
COG3082. LUCA.
HOGENOMiHOG000218499.
KOiK09904.
OMAiHQAPTDL.

Family and domain databases

Gene3Di1.10.3390.10. 1 hit.
HAMAPiMF_00816. UPF0352. 1 hit.
InterProiView protein in InterPro
IPR009857. UPF0352.
IPR023202. YejL_dom.
PfamiView protein in Pfam
PF07208. DUF1414. 1 hit.
PIRSFiPIRSF006188. UCP006188. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD027794. UPF0352. 1 hit.
SUPFAMiSSF158651. SSF158651. 1 hit.

Sequencei

Sequence statusi: Complete.

Q87MV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPITSKYTDE QVEKILAEVA LVLEKHAASP ELTLMIAGNI ATNVLNQRVA
60 70
ASQRKLIAEK FAQALMSSLE TPKTH
Length:75
Mass (Da):8,204
Last modified:June 1, 2003 - v1
Checksum:iFB538418ABFD6A05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA. Translation: BAC60392.1.
RefSeqiNP_798508.1. NC_004603.1.
WP_005461743.1. NC_004603.1.

Genome annotation databases

EnsemblBacteriaiBAC60392; BAC60392; BAC60392.
GeneIDi1189641.
KEGGivpa:VP2129.
PATRICifig|223926.6.peg.2037.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiY2129_VIBPA
AccessioniPrimary (citable) accession number: Q87MV2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: June 1, 2003
Last modified: June 7, 2017
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries