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Protein

tRNA pseudouridine synthase C

Gene

truC

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-65 in transfer RNAs.By similarity

Catalytic activityi

tRNA uridine(65) = tRNA pseudouridine(65).

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei58By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processtRNA processing

Enzyme and pathway databases

BioCyciVPAR223926:G1GTB-2378-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase C (EC:5.4.99.26)
Alternative name(s):
tRNA pseudouridine(65) synthase
tRNA pseudouridylate synthase C
tRNA-uridine isomerase C
Gene namesi
Name:truC
Ordered Locus Names:VP2322
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001627211 – 246tRNA pseudouridine synthase CAdd BLAST246

Proteomic databases

PRIDEiQ87MD4

Interactioni

Protein-protein interaction databases

STRINGi223926.VP2322

Structurei

3D structure databases

ProteinModelPortaliQ87MD4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.Curated

Phylogenomic databases

eggNOGiENOG4105DR9 Bacteria
COG0564 LUCA
HOGENOMiHOG000275920
KOiK06175
OMAiQHVFPIH

Family and domain databases

InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit

Sequencei

Sequence statusi: Complete.

Q87MD4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPVELEIVY QDEYFVAVNK PAGMLVHRSW LDKHETQFVM QTLRDQIGQH
60 70 80 90 100
VFPLHRLDRP TSGVLVFALS SEVASQVMPM FAEHKMEKTY HAIVRGWIEE
110 120 130 140 150
EGVLDYALKV ELDKIADKFA SQEKEAQEAV TAYKPLAKVE VPYSTGKFPT
160 170 180 190 200
TRYCLMEMKP KTGRKHQLRR HMAHLRHPIV GDTSHGDGKH NKLFRNEFDS
210 220 230 240
HRLLLHASEL RFVHPFTNEE LVMKASIDDT WQQLFTRFEW DEELVK
Length:246
Mass (Da):28,712
Last modified:June 1, 2003 - v1
Checksum:i89AF262B22FD4E26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA Translation: BAC60585.1
RefSeqiNP_798701.1, NC_004603.1
WP_011106043.1, NC_004603.1

Genome annotation databases

EnsemblBacteriaiBAC60585; BAC60585; BAC60585
GeneIDi1189835
KEGGivpa:VP2322
PATRICifig|223926.6.peg.2224

Similar proteinsi

Entry informationi

Entry nameiTRUC_VIBPA
AccessioniPrimary (citable) accession number: Q87MD4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 9, 2003
Last sequence update: June 1, 2003
Last modified: May 23, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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