Q87L98 (Q87L98_VIBPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase, class V EMBL BAC60977.1

Gene names

Ordered Locus Names:

VP2714

Organism

Vibrio parahaemolyticus [Complete proteome] [HAMAP]

Taxonomic identifier

670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	373 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU004504 SAAS SAAS020578
Sequence similarities	Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU004075

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020578
Molecular function	Aminotransferase EMBL BAC60977.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87L98 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 9CB4AFCADC433E03	FASTA	373	40,785
	10 20 30 40 50 60 MPIQSFIPPH RILMGPGPSD VYPQVLQALS RPTVGHLDPL FIAMMDELKQ LLKYAFQTEN 70 80 90 100 110 120 EFTIAVSAPG SAGMETCFVN LIEKGDKVIV CRNGVFGERM RENVIRAGGE VVLVDDEWGA 130 140 150 160 170 180 PVSVDKVEQA LQQHPDTKIL AFVHAETSTG AVSDAQTLGK LAKQYNVLSI VDAVTSLGGV 190 200 210 220 230 240 PLKVDEWQLD AVYSGSQKCL SCVPGLSPVT LSPAAIEKIQ SRTTPVQSWF LDQSLVLGYW 250 260 270 280 290 300 SGEGKRSYHH TAPVNSLYAL HEALLVLQNE GLENAWARHQ LMHEKLKDGL QKLGFEFVVE 310 320 330 340 350 360 EAYRLPQLNA IYVPEGIDEA KVRAHLLETY NLEIGAGLGV LAGKAWRIGL MGYGARAENV 370 ALCLKALEES LTE

References

[1]

"Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae." Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T. Lancet 361:743-749(2003) [PubMed: 12620739] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RIMD 2210633 / Serotype O3:K6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000031 Genomic DNA. Translation: BAC60977.1.
RefSeq	NP_799093.1. NC_004603.1.
3D structure databases
HSSP	HSSP built from PDB template 1H0C based on UniProtKB P21549.
ProteinModelPortal	Q87L98.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1190259.
GenomeReviews	Gene locus VP2714 in contig BA000031_GR.
KEGG	vpa:VP2714.
NMPDR	fig|223926.1.peg.2714.
PATRIC	20143626. VBIVibPar50997_2610.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG700056.
OMA	MRQNVER.
ProtClustDB	CLSK2391058.
Enzyme and pathway databases
BioCyc	VPAR223926:VP2714-MONOMER.
Family and domain databases
InterPro	IPR000192. Aminotrans_V/Cys_dSase. IPR020578. Aminotrans_V_PyrdxlP_BS. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR024169. SP_NH2Trfase/AEP_transaminase. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00830.
Pfam	PF00266. Aminotran_5. 1 hit. [Graphical view]
PIRSF	PIRSF000524. SPT. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00595. AA_TRANSFER_CLASS_5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q87L98_VIBPA

Accession

Primary (citable) accession number: Q87L98

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)