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Q87L54

- CAPP_VIBPA

UniProt

Q87L54 - CAPP_VIBPA

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Protein

Phosphoenolpyruvate carboxylase

Gene
ppc, VP2761
Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

Cofactori

Magnesium By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei138 – 1381 By similarity
Active sitei544 – 5441 By similarity

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation

Keywords - Ligandi

Magnesium

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-2855-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Short name:
PEPC
Short name:
PEPCase
Gene namesi
Name:ppc
Ordered Locus Names:VP2761
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002493: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 877877Phosphoenolpyruvate carboxylaseUniRule annotationPRO_0000166648Add
BLAST

Proteomic databases

PRIDEiQ87L54.

Interactioni

Protein-protein interaction databases

STRINGi223926.VP2761.

Structurei

3D structure databases

ProteinModelPortaliQ87L54.
SMRiQ87L54. Positions 4-877.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiELSTISC.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87L54-1 [UniParc]FASTAAdd to Basket

« Hide

MNEKYAALKS NVRMLGHLLG NTIRDAHGEE IFEKVETIRK LSKSAQAGNQ    50
ADRESLIEEI KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC 100
EPDAINSLFS KLVQNDVSKL DTAQAVRDLN IELVLTAHPT EITRRTMINK 150
LVKINECLSK LELSDLSSKE RKKTERRLEQ LIAQSWHSDV IRQQRPTPLD 200
EAKWGFAVVE NSLWEAVPDF LREMNDRLKS YLGEGLPIDA RPVHFSSWMG 250
GDRDGNPFVT HSVTREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR 300
ELAGEDQHEP YRAILKQLRA LLNETKDILD AKIHGQKLAV KAPLQKVEQL 350
WDPLYACYQS LHECGMGVIA DGSLLDTLRR VKAFGVHLVR LDIRQESTRH 400
ADVLSELTRY LGIGDYEQWS EQDKIAFLTN ELASKRPLLP RDWEPSEPVK 450
EVLDTCKIIA LQPREAFGAY VISMARTASD VLAVHLLLQE AGCPYRMDVC 500
PLFETLDDLN NAESVIKQLM SIDLYRGFIQ NHQMVMIGYS DSAKDAGVMS 550
AGWAQYHAME SLVKVAEDEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK 600
SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE 650
WRDLMEVLSE VSCEAYRGVV RGEPDFVPYF RQATPELELG KLPLGSRPAK 700
RNPNGGVESL RAIPWIFSWS QNRLVLPAWL GAGEAIQYSV DKGHQALLEE 750
MCREWPFFST RLGMLEMVYT KCNMEISRYY DQRLVEPQLQ PLGDRLREQL 800
QRDIKSVLNV ENNENLMQSD PWGQESIRLR NIYVEPLNML QAELLYRTRQ 850
TEEASANLEE ALMVTIAGIA AGMRNTG 877
Length:877
Mass (Da):99,273
Last modified:July 25, 2003 - v2
Checksum:i3A61D009D5493105
GO

Sequence cautioni

The sequence BAC61024.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000031 Genomic DNA. Translation: BAC61024.1. Different initiation.
RefSeqiNP_799140.2. NC_004603.1.

Genome annotation databases

EnsemblBacteriaiBAC61024; BAC61024; BAC61024.
GeneIDi1190311.
KEGGivpa:VP2761.
PATRICi20143730. VBIVibPar50997_2657.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000031 Genomic DNA. Translation: BAC61024.1 . Different initiation.
RefSeqi NP_799140.2. NC_004603.1.

3D structure databases

ProteinModelPortali Q87L54.
SMRi Q87L54. Positions 4-877.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 223926.VP2761.

Proteomic databases

PRIDEi Q87L54.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAC61024 ; BAC61024 ; BAC61024 .
GeneIDi 1190311.
KEGGi vpa:VP2761.
PATRICi 20143730. VBIVibPar50997_2657.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238648.
KOi K01595.
OMAi ELSTISC.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci VPAR223926:GHK4-2855-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae."
    Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.
    Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RIMD 2210633.

Entry informationi

Entry nameiCAPP_VIBPA
AccessioniPrimary (citable) accession number: Q87L54
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2003
Last sequence update: July 25, 2003
Last modified: May 14, 2014
This is version 63 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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