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Q87L54

- CAPP_VIBPA

UniProt

Q87L54 - CAPP_VIBPA

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 2 (25 Jul 2003)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

    Cofactori

    Magnesium.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei138 – 1381UniRule annotation
    Active sitei544 – 5441UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    Lyase

    Keywords - Biological processi

    Carbon dioxide fixation

    Keywords - Ligandi

    Magnesium

    Enzyme and pathway databases

    BioCyciVPAR223926:GHK4-2855-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:VP2761
    OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
    Taxonomic identifieri223926 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002493: Chromosome 1

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 877877Phosphoenolpyruvate carboxylasePRO_0000166648Add
    BLAST

    Proteomic databases

    PRIDEiQ87L54.

    Interactioni

    Protein-protein interaction databases

    STRINGi223926.VP2761.

    Structurei

    3D structure databases

    ProteinModelPortaliQ87L54.
    SMRiQ87L54. Positions 4-877.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiELSTISC.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q87L54-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNEKYAALKS NVRMLGHLLG NTIRDAHGEE IFEKVETIRK LSKSAQAGNQ    50
    ADRESLIEEI KHLPDEQLTP VTRAFNQFLN LTNIAEQYHT ISRHCEEHIC 100
    EPDAINSLFS KLVQNDVSKL DTAQAVRDLN IELVLTAHPT EITRRTMINK 150
    LVKINECLSK LELSDLSSKE RKKTERRLEQ LIAQSWHSDV IRQQRPTPLD 200
    EAKWGFAVVE NSLWEAVPDF LREMNDRLKS YLGEGLPIDA RPVHFSSWMG 250
    GDRDGNPFVT HSVTREVLLL SRWKAADLYL NDINELISEL SMTVSNDQVR 300
    ELAGEDQHEP YRAILKQLRA LLNETKDILD AKIHGQKLAV KAPLQKVEQL 350
    WDPLYACYQS LHECGMGVIA DGSLLDTLRR VKAFGVHLVR LDIRQESTRH 400
    ADVLSELTRY LGIGDYEQWS EQDKIAFLTN ELASKRPLLP RDWEPSEPVK 450
    EVLDTCKIIA LQPREAFGAY VISMARTASD VLAVHLLLQE AGCPYRMDVC 500
    PLFETLDDLN NAESVIKQLM SIDLYRGFIQ NHQMVMIGYS DSAKDAGVMS 550
    AGWAQYHAME SLVKVAEDEG VELTLFHGRG GTVGRGGAPA HAALLSQPPK 600
    SLKGGLRVTE QGEMIRFKLG LPDVAVNSFN LYASAILEAN LLPPPEPKQE 650
    WRDLMEVLSE VSCEAYRGVV RGEPDFVPYF RQATPELELG KLPLGSRPAK 700
    RNPNGGVESL RAIPWIFSWS QNRLVLPAWL GAGEAIQYSV DKGHQALLEE 750
    MCREWPFFST RLGMLEMVYT KCNMEISRYY DQRLVEPQLQ PLGDRLREQL 800
    QRDIKSVLNV ENNENLMQSD PWGQESIRLR NIYVEPLNML QAELLYRTRQ 850
    TEEASANLEE ALMVTIAGIA AGMRNTG 877
    Length:877
    Mass (Da):99,273
    Last modified:July 25, 2003 - v2
    Checksum:i3A61D009D5493105
    GO

    Sequence cautioni

    The sequence BAC61024.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000031 Genomic DNA. Translation: BAC61024.1. Different initiation.
    RefSeqiNP_799140.2. NC_004603.1.

    Genome annotation databases

    EnsemblBacteriaiBAC61024; BAC61024; BAC61024.
    GeneIDi1190311.
    KEGGivpa:VP2761.
    PATRICi20143730. VBIVibPar50997_2657.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000031 Genomic DNA. Translation: BAC61024.1 . Different initiation.
    RefSeqi NP_799140.2. NC_004603.1.

    3D structure databases

    ProteinModelPortali Q87L54.
    SMRi Q87L54. Positions 4-877.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 223926.VP2761.

    Proteomic databases

    PRIDEi Q87L54.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC61024 ; BAC61024 ; BAC61024 .
    GeneIDi 1190311.
    KEGGi vpa:VP2761.
    PATRICi 20143730. VBIVibPar50997_2657.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi ELSTISC.
    OrthoDBi EOG6TJ7T8.

    Enzyme and pathway databases

    BioCyci VPAR223926:GHK4-2855-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae."
      Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.
      Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RIMD 2210633.

    Entry informationi

    Entry nameiCAPP_VIBPA
    AccessioniPrimary (citable) accession number: Q87L54
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 25, 2003
    Last sequence update: July 25, 2003
    Last modified: October 1, 2014
    This is version 64 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3