Q87K12 (Q87K12_VIBPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative exopolygalacturonate lyase EMBL BAC61429.1

Gene names

Ordered Locus Names:

VPA0086

Organism

Vibrio parahaemolyticus [Complete proteome] [HAMAP]

Taxonomic identifier

670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	742 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL BAC61429.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87K12 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 6B498EF985A0AD1E	FASTA	742	80,506
	10 20 30 40 50 60 MKKHTLALCL AAILAPAAHA AEIKVEDLTW KAITFGQSTD MNFGSTILPE KVGVNQVTVN 70 80 90 100 110 120 GEAVAAGKLA STFTIESRGG KLANSHEGLT FYYTELPTDV NFTLSADVVL EQLGPETGAT 130 140 150 160 170 180 PNRQEGAGLM VRDILGAERL VPQPEGHEEF PSASNMVMNL MRSHTRANDG MTNINASFRE 190 200 210 220 230 240 GVYQPWGTPG NRLSRVDYVE GVPYGTAETY RMTLTRTNDG FKVSYRNGEK FVEQAVKGAN 250 260 270 280 290 300 ANIVEMQNSD SQYVGFFASR NAKMTVSNVD LQLAAADTVD APKYAAKQGE LVFQIASSPR 310 320 330 340 350 360 SATKEYPVQA RANYSGEFEV LHNDKVVAKQ TVTAGELFSQ WLTLDSGANQ MEVRFTAIDG 370 380 390 400 410 420 PNKETQAHRY SVDVVSLPDP MTLYVAPNGS DKGNGSQAQP LDLATAVELL PAGGTIILKD 430 440 450 460 470 480 GDYQGMEIPL TASGSADKLK HLRAEGDNVR FVSELRHKAN YWHYQGIEVA GAQFIVHGSH 490 500 510 520 530 540 NTFEKMVTHG APDTGFVITS PENIGRALWA SYNQVIESES YNNMDPSQIN ADGFAAKMRI 550 560 570 580 590 600 GDGNTFIRCL SHHNIDDGWD LFNKVEDGAN GAVTILDSIS FSNGRTLDVA NKGGTIGNGF 610 620 630 640 650 660 KLGGEGIPVP HVVKNSLSFN NNMDGFTDNF NPGALVLSDN VSIDNKRFNY LFRKSPYSGE 670 680 690 700 710 720 IEQGTFTNNR SYRFHVSSKY DDVINSAKST GNALVENGTT YTSDGKAVDS KMLAPLKQAS 730 740 VIDTQQAIPG KQEAMQLKQL IH

References

[1]

"Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae." Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T. Lancet 361:743-749(2003) [PubMed: 12620739] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RIMD 2210633 / Serotype O3:K6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000032 Genomic DNA. Translation: BAC61429.1.
RefSeq	NP_799596.1. NC_004605.1.
3D structure databases
ProteinModelPortal	Q87K12.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1190765.
GenomeReviews	Gene locus VPA0086 in contig BA000032_GR.
KEGG	vpa:VPA0086.
NMPDR	fig|223926.1.peg.3166.
PATRIC	20144607. VBIVibPar50997_3046.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG297091.
OMA	DGFTDNF.
ProtClustDB	CLSK908043.
Enzyme and pathway databases
BioCyc	VPAR223926:VPA0086-MONOMER.
Family and domain databases
InterPro	IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q87K12_VIBPA

Accession

Primary (citable) accession number: Q87K12

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)