Q87I01 (Q87I01_VIBPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

Ordered Locus Names:

VPA0805

Organism

Vibrio parahaemolyticus [Complete proteome] [HAMAP]

Taxonomic identifier

670 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. SAAS SAAS006223 RuleBase RU003981
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase SAAS SAAS006223 RuleBase RU003981 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87I01 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: 51FC31A1D4A24D57	FASTA	372	40,322
	10 20 30 40 50 60 MTQELLKTPL HALHVEVGAK MVPFAGYDMP VQYPLGVKKE HLHTRDAAGL FDVSHMGQLR 70 80 90 100 110 120 LIGEGAAAFL ETLVPVDIVD LESGKQRYAF FTNEEGGIMD DLMVANLGDH LFVVVNAACK 130 140 150 160 170 180 EQDIAHLKAH LPSGVELEVI EDRALLAIQG PQAATVLARF APEVADMLFM DIRKVEILGA 190 200 210 220 230 240 ECIVSRSGYT GEDGYEISVP ADKAEELARK LTAEEEVEWI GLGARDSLRL ECGLCLYGHD 250 260 270 280 290 300 LDTTTTPVEA SLLWGIQKVR RVGGEREGGF PGADIILKQI ETKDVARKRV GLVGQTKAPV 310 320 330 340 350 360 REGVELFDAD GAKIGIVTSG TAGPNAGKPV SMGYVRADLA AIGTELFAEV RGKMLPMTVE 370 KMPFVPQRYY RG

References

[1]

"Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae." Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T. Lancet 361:743-749(2003) [PubMed: 12620739] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RIMD 2210633 / Serotype O3:K6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000032 Genomic DNA. Translation: BAC62148.1.
RefSeq	NP_800315.1. NC_004605.1.
3D structure databases
ProteinModelPortal	Q87I01.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1191494.
GenomeReviews	Gene locus VPA0805 in contig BA000032_GR.
KEGG	vpa:VPA0805.
NMPDR	fig|223926.1.peg.4922.
PATRIC	20146007. VBIVibPar50997_3736.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG299834.
OMA	MPVQYPL.
ProtClustDB	CLSK910129.
Enzyme and pathway databases
BioCyc	VPAR223926:VPA0805-MONOMER.
Family and domain databases
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. [Graphical view]
KO	K00605.
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. GcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q87I01_VIBPA

Accession

Primary (citable) accession number: Q87I01

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)