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Protein
Submitted name:

Putative two-component response regulator

Gene

VPA1049

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-4288-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative two-component response regulatorImported
Gene namesi
Ordered Locus Names:VPA1049Imported
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000002493 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi223926.VPA1049.

Structurei

3D structure databases

ProteinModelPortaliQ87HB6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000291805.
OMAiERKWGDL.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q87HB6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPILLVDDS KTVLLYMTSA LQKQGYEVIA VEDGEAALEV LTHRKDIQFV
60 70 80 90 100
LSDLMMPGLS GIDLCRLLKS AAFERYIFFV LLSSRNDQGS IVKGIDAGAD
110 120 130 140 150
DFVDKKTSVE ELQARIRAGF RTLDLHNMLL TRNQELDVAY QTIRQDLESA
160 170 180 190 200
GDLMRQLLPV EQQIGATKLS YSYLPCSQLG GDMLGYAALD EQHVAFYVFD
210 220 230 240 250
VSGHGISSAL MSFSIQKTLS RSCGPESVTT DLVEGEYVVS EPNVVVERLN
260 270 280 290 300
LRYQQTPDSQ LYFTIVYAVL NTQTGKLRYC TAGHPKFLWR HQSEATIDMV
310 320 330 340 350
GDENFIVGAL APMQYKGGEI TLEPNDSIWC FSDGVVEARY ENEFFSVNRL
360 370 380 390 400
IANVQSVSGL PFEAQVSSVV ESIKRWQVKE ELDDDLTLLQ LQWFGPNTST

CEGEDD
Length:406
Mass (Da):45,385
Last modified:June 1, 2003 - v1
Checksum:i64B70A2840EE6EF8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000032 Genomic DNA. Translation: BAC62392.1.
RefSeqiNP_800559.1. NC_004605.1.

Genome annotation databases

EnsemblBacteriaiBAC62392; BAC62392; BAC62392.
GeneIDi1191744.
KEGGivpa:VPA1049.
PATRICi20146501. VBIVibPar50997_3978.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000032 Genomic DNA. Translation: BAC62392.1.
RefSeqiNP_800559.1. NC_004605.1.

3D structure databases

ProteinModelPortaliQ87HB6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223926.VPA1049.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC62392; BAC62392; BAC62392.
GeneIDi1191744.
KEGGivpa:VPA1049.
PATRICi20146501. VBIVibPar50997_3978.

Phylogenomic databases

HOGENOMiHOG000291805.
OMAiERKWGDL.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciVPAR223926:GHK4-4288-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae."
    Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.
    Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RIMD 2210633Imported.

Entry informationi

Entry nameiQ87HB6_VIBPA
AccessioniPrimary (citable) accession number: Q87HB6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: January 7, 2015
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.