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Q87G06

- Q87G06_VIBPA

UniProt

Q87G06 - Q87G06_VIBPA

Protein

Superoxide dismutase [Cu-Zn]

Gene

VPA1514

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciVPAR223926:GHK4-4754-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:VPA1514Imported
    OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)Imported
    Taxonomic identifieri223926 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000002493: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi223926.VPA1514.

    Structurei

    3D structure databases

    ProteinModelPortaliQ87G06.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000263449.
    KOiK04565.
    OMAiDHPKPLG.
    OrthoDBiEOG6K13RS.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q87G06-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLKGLLCISA AAAFVMTPNA LAQSITMTDL GTNQAVGTVD LSESDYGIVF    50
    TPNLSGIPAG LHGFHVHANP SCDSAEKDGK TVVGGGAGGH YDPDNTGQHG 100
    FPWTDGNHLG DLPALYADME GNANQPVLAP RLKMSDLKGR ALMIHAGGDN 150
    HSDQPAKLGG GGARIVCGVI D 171
    Length:171
    Mass (Da):17,473
    Last modified:June 1, 2003 - v1
    Checksum:i2A989DA5B5BF622A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000032 Genomic DNA. Translation: BAC62857.1.
    RefSeqiNP_801024.1. NC_004605.1.

    Genome annotation databases

    EnsemblBacteriaiBAC62857; BAC62857; BAC62857.
    GeneIDi1192210.
    KEGGivpa:VPA1514.
    PATRICi20147421. VBIVibPar50997_4438.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000032 Genomic DNA. Translation: BAC62857.1 .
    RefSeqi NP_801024.1. NC_004605.1.

    3D structure databases

    ProteinModelPortali Q87G06.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 223926.VPA1514.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAC62857 ; BAC62857 ; BAC62857 .
    GeneIDi 1192210.
    KEGGi vpa:VPA1514.
    PATRICi 20147421. VBIVibPar50997_4438.

    Phylogenomic databases

    HOGENOMi HOG000263449.
    KOi K04565.
    OMAi DHPKPLG.
    OrthoDBi EOG6K13RS.

    Enzyme and pathway databases

    BioCyci VPAR223926:GHK4-4754-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V. cholerae."
      Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K., Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S., Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.
      Lancet 361:743-749(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RIMD 2210633Imported.

    Entry informationi

    Entry nameiQ87G06_VIBPA
    AccessioniPrimary (citable) accession number: Q87G06
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3