Q87F57 (Q87F57_XYLFT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL AAO27980.1

Gene names

Ordered Locus Names:

PD_0080

Organism

Xylella fastidiosa (strain Temecula1 / ATCC 700964) [Complete proteome] [HAMAP]

Taxonomic identifier

183190 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length	460 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell adhesion Inferred from electronic annotation. Source: InterPro fucose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q87F57 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: D975746686090EC4	FASTA	460	51,330
	10 20 30 40 50 60 MTQSSLFASL RVLIGFCLAA LICPVAIAQN VAVMKPSPQQ IAWQDLEFGV IVHFNPNTWL 70 80 90 100 110 120 DQEWGDGSAS PKVFNPMHVD PGQWARAAKA AGAKYLILVA KHHDGFALWP TAQSEYSVKN 130 140 150 160 170 180 SPWMGGKGDV VKLTAAAVRQ QGMGFGIYLS PWDRHEPKYA NVDAYNQFYA AQLVELASHY 190 200 210 220 230 240 GPLTEWWLDG AGSAGHEYDF DKYLEQLRTY QPNTMVFADT ALFKYGDIRW VGNEAGVIEG 250 260 270 280 290 300 ENWNVIDRHG DLRWRPVEVD TPLHRLEWFW HPNNERTLKS VDELLAIWEK SVGRGGQLVL 310 320 330 340 350 360 GIAPDTRGLL PEADVKRLQA MGVAIQACYG AGKNLVPVHL KNHQAIVAAV DGDVDTFWSA 370 380 390 400 410 420 PHGSHSAMLE LHFKQPITFD TSLTMEWLND GQLVQKYAIE VWQKGKWVRV AQAQAIGKMK 430 440 450 460 IDHFGSLTAS RVRLNILSSA DAAHIREFQL FNIGNSRAAH

References

[1]

"Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa." Van Sluys M.A., de Oliveira M.C., Monteiro-Vitorello C.B., Miyaki C.Y., Furlan L.R., Camargo L.E.A., da Silva A.C.R., Moon D.H., Takita M.A., Lemos E.G.M., Machado M.A., Ferro M.I.T., da Silva F.R., Goldman M.H.S., Goldman G.H., Lemos M.V.F., El-Dorry H., Tsai S.M. , Carrer H., Carraro D.M., de Oliveira R.C., Nunes L.R., Siqueira W.J., Coutinho L.L., Kimura E.T., Ferro E.S., Harakava R., Kuramae E.E., Marino C.L., Giglioti E., Abreu I.L., Alves L.M.C., do Amaral A.M., Baia G.S., Blanco S.R., Brito M.S., Cannavan F.S., Celestino A.V., da Cunha A.F., Fenille R.C., Ferro J.A., Formighieri E.F., Kishi L.T., Leoni S.G., Oliveira A.R., Rosa V.E. Jr., Sassaki F.T., Sena J.A.D., de Souza A.A., Truffi D., Tsukumo F., Yanai G.M., Zaros L.G., Civerolo E.L., Simpson A.J.G., Almeida N.F. Jr., Setubal J.C., Kitajima J.P. J. Bacteriol. 185:1018-1026(2003) [PubMed: 12533478] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE009442 Genomic DNA. Translation: AAO27980.1.
RefSeq	NP_778331.1. NC_004556.1.
3D structure databases
ProteinModelPortal	Q87F57.
ModBase	Search...
Protein-protein interaction databases
STRING	Q87F57.
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1144292.
GenomeReviews	Gene locus PD_0080 in contig AE009442_GR.
KEGG	xft:PD0080.
PATRIC	24147552. VBIXylFas71109_0112.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3669.
HOGENOM	HBG697253.
OMA	WIANENA.
ProtClustDB	CLSK557105.
Enzyme and pathway databases
BioCyc	XFAS183190:PD_0080-MONOMER.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR000933. Glyco_hydro_29. IPR016286. Glyco_hydro_29_sub. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01206.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. PF00754. F5_F8_type_C. 1 hit. [Graphical view]
PRINTS	PR00741. GLHYDRLASE29.
SMART	SM00812. Alpha_L_fucos. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q87F57_XYLFT

Accession

Primary (citable) accession number: Q87F57

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2003
Last sequence update:	June 1, 2003
Last modified:	December 14, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)