Reviewed, UniProtKB/Swiss-Prot Q87B70 (Y1588_XYLFT)

Names and origin

Protein names

Recommended name:
    UPF0011 protein PD_1588

Gene names

Ordered Locus Names:

PD_1588

Organism

Xylella fastidiosa (strain Temecula1 / ATCC 700964) [Complete proteome] [HAMAP]

Taxonomic identifier

183190 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length	273 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the UPF0011 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	methyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 273	273	UPF0011 protein PD_1588		PRO_0000211963

Sequences

	Sequence		Length	Mass (Da)
	Q87B70-1 [UniParc]. Last modified June 16, 2003. Version 1. Checksum: 605BBF27C93D0036	FASTA	273	29,362
	10 20 30 40 50 60 MSTPGTLHIV ATPIGNLGDL SPRAQHILRT VTMICAEDTR HTRQLLAHFG IERPLLALHA 70 80 90 100 110 120 HNEDTLAERI ITRLISGESL ALVSDAGTPL ISDPGFLLVR AARAAGIRVT PVPGPSALIA 130 140 150 160 170 180 ALSVSGLPSN RFTFEGFLPA KPTARRDRLT HLAHEPRTLI FYEASHRIAE CLTDLATIFG 190 200 210 220 230 240 SMRIAVVARE LTKIFETVLD GTLATLQTQV ANDENQRKGE FVIIVQGAAD QDAAKITEGR 250 260 270 RIYALLKEHL PPSSAAKLAA EITGAPRKAL YGG

References

[1]

"Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa." Van Sluys M.A., de Oliveira M.C., Monteiro-Vitorello C.B., Miyaki C.Y., Furlan L.R., Camargo L.E.A., da Silva A.C.R., Moon D.H., Takita M.A., Lemos E.G.M., Machado M.A., Ferro M.I.T., da Silva F.R., Goldman M.H.S., Goldman G.H., Lemos M.V.F., El-Dorry H., Tsai S.M. , Carrer H., Carraro D.M., de Oliveira R.C., Nunes L.R., Siqueira W.J., Coutinho L.L., Kimura E.T., Ferro E.S., Harakava R., Kuramae E.E., Marino C.L., Giglioti E., Abreu I.L., Alves L.M.C., do Amaral A.M., Baia G.S., Blanco S.R., Brito M.S., Cannavan F.S., Celestino A.V., da Cunha A.F., Fenille R.C., Ferro J.A., Formighieri E.F., Kishi L.T., Leoni S.G., Oliveira A.R., Rosa V.E. Jr., Sassaki F.T., Sena J.A.D., de Souza A.A., Truffi D., Tsukumo F., Yanai G.M., Zaros L.G., Civerolo E.L., Simpson A.J.G., Almeida N.F. Jr., Setubal J.C., Kitajima J.P. J. Bacteriol. 185:1018-1026(2003) [PubMed: 12533478] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE009442 Genomic DNA. Translation: AAO29430.1.
RefSeq	NP_779781.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q87B70.
Genome annotation databases
GeneID	1142930.
GenomeReviews	Gene locus PD_1588 in contig AE009442_GR.
KEGG	xft:PD1588.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q87B70.
OMA	ASDRFCF
Enzyme and pathway databases
BioCyc	XFAS183190:PD_1588-MON.
Family and domain databases
InterPro	IPR000878. 4pyrrol_Mease. IPR014777. 4pyrrole_Mease_sub1. IPR008189. UPF0011. IPR018063. UPF0011_CS. [Graphical view]
Gene3D	G3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
Pfam	PF00590. TP_methylase. 1 hit. [Graphical view]
TIGRFAMs	TIGR00096. UPF0011. 1 hit.
PROSITE	PS01296. UPF0011. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y1588_XYLFT

Accession

Primary (citable) accession number: Q87B70

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 16, 2003
Last sequence update:	June 16, 2003
Last modified:	November 3, 2009
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)