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Q87A43

- Q87A43_XYLFT

UniProt

Q87A43 - Q87A43_XYLFT

Protein

Superoxide dismutase

Gene

sodM

Organism
Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 1 (01 Jun 2003)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Enzyme and pathway databases

    BioCyciXFAS183190:GIX4-1988-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodMImported
    Ordered Locus Names:PD_1988Imported
    OrganismiXylella fastidiosa (strain Temecula1 / ATCC 700964)Imported
    Taxonomic identifieri183190 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
    ProteomesiUP000002516: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi183190.PD1988.

    Structurei

    3D structure databases

    ProteinModelPortaliQ87A43.
    SMRiQ87A43. Positions 2-198.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    KOiK04564.
    OMAiEPHIDTQ.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q87A43-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAYTLPILPY AYDALEPHID AQTMEIHYTK HHATYINNLN AALEGTEYAD    50
    LPIEELLRNL KSLPESLQVP VRNNGGGHAN HSLFWTVMAQ DGGGKPKGEV 100
    AKAIDQQLGG FETFKDAFTK AALSRFGSGW SLLNVTPSKT LVVESSANQD 150
    SPLCDGKTSI LCLDVWEHAY YLHYQNRRAD YVNAFYNVIN WDEVERRYVV 200
    AMS 203
    Length:203
    Mass (Da):22,769
    Last modified:June 1, 2003 - v1
    Checksum:i8EA59DCBDB913903
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009442 Genomic DNA. Translation: AAO29817.1.
    RefSeqiNP_780168.1. NC_004556.1.

    Genome annotation databases

    EnsemblBacteriaiAAO29817; AAO29817; PD_1988.
    GeneIDi1143330.
    KEGGixft:PD1988.
    PATRICi24152557. VBIXylFas71109_2573.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE009442 Genomic DNA. Translation: AAO29817.1 .
    RefSeqi NP_780168.1. NC_004556.1.

    3D structure databases

    ProteinModelPortali Q87A43.
    SMRi Q87A43. Positions 2-198.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 183190.PD1988.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAO29817 ; AAO29817 ; PD_1988 .
    GeneIDi 1143330.
    KEGGi xft:PD1988.
    PATRICi 24152557. VBIXylFas71109_2573.

    Phylogenomic databases

    eggNOGi COG0605.
    KOi K04564.
    OMAi EPHIDTQ.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci XFAS183190:GIX4-1988-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa."
      Van Sluys M.A., de Oliveira M.C., Monteiro-Vitorello C.B., Miyaki C.Y., Furlan L.R., Camargo L.E.A., da Silva A.C.R., Moon D.H., Takita M.A., Lemos E.G.M., Machado M.A., Ferro M.I.T., da Silva F.R., Goldman M.H.S., Goldman G.H., Lemos M.V.F., El-Dorry H., Tsai S.M.
      , Carrer H., Carraro D.M., de Oliveira R.C., Nunes L.R., Siqueira W.J., Coutinho L.L., Kimura E.T., Ferro E.S., Harakava R., Kuramae E.E., Marino C.L., Giglioti E., Abreu I.L., Alves L.M.C., do Amaral A.M., Baia G.S., Blanco S.R., Brito M.S., Cannavan F.S., Celestino A.V., da Cunha A.F., Fenille R.C., Ferro J.A., Formighieri E.F., Kishi L.T., Leoni S.G., Oliveira A.R., Rosa V.E. Jr., Sassaki F.T., Sena J.A.D., de Souza A.A., Truffi D., Tsukumo F., Yanai G.M., Zaros L.G., Civerolo E.L., Simpson A.J.G., Almeida N.F. Jr., Setubal J.C., Kitajima J.P.
      J. Bacteriol. 185:1018-1026(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Temecula1 / ATCC 700964Imported.

    Entry informationi

    Entry nameiQ87A43_XYLFT
    AccessioniPrimary (citable) accession number: Q87A43
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2003
    Last sequence update: June 1, 2003
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3