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Protein

Superoxide dismutase

Gene

sodM

Organism
Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi81Divalent metal cationUniRule annotation1
Metal bindingi164Divalent metal cationUniRule annotation1
Metal bindingi168Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodMImported
Ordered Locus Names:PD_1988Imported
OrganismiXylella fastidiosa (strain Temecula1 / ATCC 700964)Imported
Taxonomic identifieri183190 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
Proteomesi
  • UP000002516 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ87A43
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 89Sod_Fe_NInterPro annotationAdd BLAST88
Domaini96 – 197Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564
OMAiYEGWKGE

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

Q87A43-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYTLPILPY AYDALEPHID AQTMEIHYTK HHATYINNLN AALEGTEYAD
60 70 80 90 100
LPIEELLRNL KSLPESLQVP VRNNGGGHAN HSLFWTVMAQ DGGGKPKGEV
110 120 130 140 150
AKAIDQQLGG FETFKDAFTK AALSRFGSGW SLLNVTPSKT LVVESSANQD
160 170 180 190 200
SPLCDGKTSI LCLDVWEHAY YLHYQNRRAD YVNAFYNVIN WDEVERRYVV

AMS
Length:203
Mass (Da):22,769
Last modified:June 1, 2003 - v1
Checksum:i8EA59DCBDB913903
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009442 Genomic DNA Translation: AAO29817.1
RefSeqiWP_004087549.1, NC_004556.1

Genome annotation databases

EnsemblBacteriaiAAO29817; AAO29817; PD_1988
KEGGixft:PD_1988

Similar proteinsi

Entry informationi

Entry nameiQ87A43_XYLFT
AccessioniPrimary (citable) accession number: Q87A43
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: March 28, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health