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Protein
Submitted name:

CCDC88A protein

Gene

CCDC88A

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CCDC88A proteinImported
Gene namesi
Name:CCDC88AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162381751.

PTM / Processingi

Proteomic databases

PaxDbiQ86YH1.
PeptideAtlasiQ86YH1.
PRIDEiQ86YH1.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000338728.

Structurei

3D structure databases

ProteinModelPortaliQ86YH1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili246 – 301Sequence analysisAdd BLAST56
Coiled coili315 – 366Sequence analysisAdd BLAST52
Coiled coili377 – 425Sequence analysisAdd BLAST49
Coiled coili462 – 489Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4643. Eukaryota.
ENOG410YFRJ. LUCA.
HOVERGENiHBG098485.

Family and domain databases

InterProiIPR027717. Girdin.
IPR008636. Hook-related_fam.
[Graphical view]
PANTHERiPTHR18947. PTHR18947. 1 hit.
PTHR18947:SF30. PTHR18947:SF30. 1 hit.
PfamiPF05622. HOOK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q86YH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENEIFTPLL EQFMTSPLVT WVKTFGPLAA GNGTNLDEYV ALVDGVFLNQ
60 70 80 90 100
VMLQINPKLE SQRVNKKVNN DASLRMHNLS ILVRQIKFYY QETLQQLIMM
110 120 130 140 150
SLPNVLIIGK NPFSEQGTEE VKKLLLLLLG CAVQCQKKEE FIERIQGLDF
160 170 180 190 200
DTKAAVAAHI QEVTHNQENV FDLQWMEVTD MSQEDIEPLL KNMALHLKRL
210 220 230 240 250
IDERDEHSET IIELSEERDG LHFLPHASSS AQSPCGSPGM KRTESRQHLS
260 270 280 290 300
VELADAKAKI RRLRQELEEK TEQLLDCKQE LEQMEIELKR LQQENMNLLS
310 320 330 340 350
DARSARMYRD ELDALREKAV RVDKLESEVS RYKERLHDIE FYKARVEELK
360 370 380 390 400
EDNQVLLETK TMLEDQLEGT RARSDKLHEL EKENLQLKAK LHDMEMERDM
410 420 430 440 450
DRKKIEELME ENMTLEMAQK QSMDESLHLG WELEQISRTS ELSEAPQKSL
460 470 480 490 500
GHEVNELTSS RLLKLEMENQ SLTKTVEELR TTVEKVEGNA SKILKMEKKK

K
Length:501
Mass (Da):58,271
Last modified:June 1, 2003 - v1
Checksum:iB6550F225F6CE058
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei501Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC041160 mRNA. Translation: AAH41160.1.
UniGeneiHs.292925.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC041160 mRNA. Translation: AAH41160.1.
UniGeneiHs.292925.

3D structure databases

ProteinModelPortaliQ86YH1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000338728.

Proteomic databases

PaxDbiQ86YH1.
PeptideAtlasiQ86YH1.
PRIDEiQ86YH1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

PharmGKBiPA162381751.

Phylogenomic databases

eggNOGiKOG4643. Eukaryota.
ENOG410YFRJ. LUCA.
HOVERGENiHBG098485.

Miscellaneous databases

ChiTaRSiCCDC88A. human.

Family and domain databases

InterProiIPR027717. Girdin.
IPR008636. Hook-related_fam.
[Graphical view]
PANTHERiPTHR18947. PTHR18947. 1 hit.
PTHR18947:SF30. PTHR18947:SF30. 1 hit.
PfamiPF05622. HOOK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ86YH1_HUMAN
AccessioniPrimary (citable) accession number: Q86YH1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: July 6, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.