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Q86XN7 (PRSR1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified March 6, 2013. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Proline and serine-rich protein 1
Gene names
Name:PROSER1
Synonyms:C13orf23, KIAA2032
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length944 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence caution

The sequence BAB14204.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence BAC67659.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 944944Proline and serine-rich protein 1
PRO_0000274309

Regions

Compositional bias185 – 386202Pro-rich
Compositional bias388 – 798411Ser-rich

Natural variations

Natural variant5711V → A. Ref.4 Ref.5
Corresponds to variant rs3751379 [ dbSNP | Ensembl ].
VAR_030253
Natural variant8471S → T.
Corresponds to variant rs17058955 [ dbSNP | Ensembl ].
VAR_030254

Experimental info

Sequence conflict5411L → P in BAB14204. Ref.5
Sequence conflict6661L → S in BAB14204. Ref.5
Sequence conflict7861P → L in BAB14204. Ref.5

Sequences

Sequence LengthMass (Da)Tools
Q86XN7 [UniParc].

Last modified February 6, 2007. Version 2.
Checksum: DC236EA48D320C2F

FASTA94495,698
        10         20         30         40         50         60 
MDKKSFEMVL DEIRKAVLTE YKLKAIEYVH GYFSSEQVVD LLRYFSWAEP QLKAMKALQH 

        70         80         90        100        110        120 
KMVAVQPTEV VNILNCFTFS KDKLVALELL ASNIIDAQNS RPIEDLFRVN MSEKKRCKRI 

       130        140        150        160        170        180 
LEQAFKGGCK APHAMISSCG TIPGNPYPKG RPSRINGIFP GTPLKKDGEE CTNEGKGIAA 

       190        200        210        220        230        240 
RILGPSKPPP STYNPHKPVP YPIPPCRPHA TIAPSAYNNA GLVPLANVIA PPPPPYTPNP 

       250        260        270        280        290        300 
VGTENEDLSN PSKPIQNQTF STPASQLFSP HGSNPSTPAA TPVPTASPVK AINHPSASAA 

       310        320        330        340        350        360 
ATVSGMNLLN TVLPVFPGQV SSAVHTPQPS IPNPTVIRTP SLPTAPVTSI HSTTTTPVPS 

       370        380        390        400        410        420 
IFSGLVSLPG PSATPTAATP TPGPTPRSTL GSSEAFASTS APFTSLPFST SSSAASTSNP 

       430        440        450        460        470        480 
NSASLSSVFA GLPLPLPPTS QGLSNPTPVI AGGSTPSVAG PLGVNSPLLS ALKGFLTSND 

       490        500        510        520        530        540 
TNLINSSALS SAVTSGLASL SSLTLQNSDS SASAPNKCYA PSAIPTPQRT STPGLALFPG 

       550        560        570        580        590        600 
LPSPVANSTS TPLTLPVQSP LATAASASTS VPVSCGSSAS LLRGPHPGTS DLHISSTPAA 

       610        620        630        640        650        660 
TTLPVMIKTE PTSPTPSAFK GPSHSGNPSH GTLGLSGTLG RAYTSTSVPI SLSACLNPAL 

       670        680        690        700        710        720 
SGLSSLSTPL NGSNPLSSIS LPPHGSSTPI APVFTALPSF TSLTNNFPLT GNPSLNPSVS 

       730        740        750        760        770        780 
LPGSLIATSS TAATSTSLPH PSSTAAVLSG LSASAPVSAA PFPLNLSTAV PSLFSVTQGP 

       790        800        810        820        830        840 
LSSSNPSYPG FSVSNTPSVT PALPSFPGLQ APSTVAAVTP LPVAATAPSP APVLPGFASA 

       850        860        870        880        890        900 
FSSNFNSALV AQAGLSSGLQ AAGSSVFPGL LSLPGIPGFP QNPSQSSLQE LQHNAAAQSA 

       910        920        930        940 
LLQQVHSASA LESYPAQPDG FPSYPSAPGT PFSLQPSLSQ SGWQ 

« Hide

References

[1]"The nucleotide sequence of a long cDNA clone isolated from human."
Nagase T., Kikuno R., Ohara O.
Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.
[2]"The full-ORF clone resource of the German cDNA consortium."
Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I.
BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Amygdala, Colon endothelium and Melanoma.
[3]"The DNA sequence and analysis of human chromosome 13."
Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. expand/collapse author list , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT ALA-571.
Tissue: Brain and PNS.
[5]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 165-944, VARIANT ALA-571.
Tissue: Teratocarcinoma.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB107354 mRNA. Translation: BAC67659.1. Different initiation.
AL833854 mRNA. Translation: CAD38713.1.
AL834435 mRNA. Translation: CAD39095.1.
BX647471 mRNA. Translation: CAH56138.1.
AL445590 Genomic DNA. Translation: CAI40975.1.
BC053566 mRNA. Translation: AAH53566.1.
BC064348 mRNA. Translation: AAH64348.1.
AK022723 mRNA. Translation: BAB14204.1. Different initiation.
IPIIPI00329260.
RefSeqNP_079414.3. NM_025138.4.
UniGeneHs.318526.

3D structure databases

ProteinModelPortalQ86XN7.
ModBaseSearch...

PTM databases

PhosphoSiteQ86XN7.

Polymorphism databases

DMDM125950653.

Proteomic databases

PaxDbQ86XN7.
PRIDEQ86XN7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000352251; ENSP00000332034; ENSG00000120685.
GeneID80209.
KEGGhsa:80209.
UCSCuc001uwy.3. human.

Organism-specific databases

CTD80209.
GeneCardsGC13M039585.
H-InvDBHIX0011252.
HGNCHGNC:20291. PROSER1.
HPACAB034225.
neXtProtNX_Q86XN7.
PharmGKBPA134912550.
HUGESearch...
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG12793.
HOGENOMHOG000113186.
HOVERGENHBG081845.
InParanoidQ86XN7.
OMAFLTSNDT.
OrthoDBEOG44QT29.

Gene expression databases

ArrayExpressQ86XN7.
BgeeQ86XN7.
CleanExHS_C13orf23.
GenevestigatorQ86XN7.

Family and domain databases

ProtoNetSearch...

Other

ChiTaRSPROSER1. human.
GenomeRNAi80209.
NextBio70594.

Entry information

Entry namePRSR1_HUMAN
AccessionPrimary (citable) accession number: Q86XN7
Secondary accession number(s): Q6P2S2 expand/collapse secondary AC list , Q7Z3X5, Q8N3D2, Q8N3P1, Q9H9M1
Entry history
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 6, 2013
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 13

Human chromosome 13: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations